C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: t-complex protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133003 Tcp1-007 ENSMUSG00000068039 10090 + 17:12916449-12920228 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryENSMUST00000133003
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary
ENSMUST00000133003 41.543±0.00 27.473±7.54 22.126±0.44 24.683±5.77 30.611±0.00 26.885±8.23 37.030±12.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0002 VISTA 17:12489717-13093070

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321394 TCP1-001 protein_coding Homo_sapiens 0 686
ENST00000392168 TCP1-004 protein_coding Homo_sapiens 0 470
ENST00000412860 TCP1P1-001 unprocessed_pseudogene Homo_sapiens 0 617
ENST00000414406 RP11-405A12.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000420894 TCP1-006 protein_coding Homo_sapiens 0 686
ENST00000504215 CTD-2122P11.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000536394 TCP1-014 protein_coding Homo_sapiens 0 409
ENST00000536607 TCP1-013 retained_intron Homo_sapiens 0 219
ENST00000537390 TCP1-007 protein_coding Homo_sapiens 0 497
ENST00000538128 TCP1-008 protein_coding Homo_sapiens 0 209
ENST00000538530 TCP1-012 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000539948 TCP1-015 protein_coding Homo_sapiens 0 582
ENST00000543517 TCP1-010 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000543532 TCP1-009 processed_transcript Homo_sapiens 0 424
ENST00000544255 TCP1-005 protein_coding Homo_sapiens 0 207
ENST00000545764 TCP1-016 retained_intron Homo_sapiens 0 422

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