C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: t-complex protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089024 Tcp1-003 ENSMUSG00000068039 10090 + 17:12916329-12924556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089024
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089024 25.606±3.95 10.599±1.08 29.056±9.79 61.532±0.00 15.984±6.62 11.659±3.67 24.627±2.52 20.370±4.39 28.722±11.17 16.535±2.69 47.305±1.80 32.399±28.77 82.532±67.89 232.652±238.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0002 VISTA 17:12489717-13093070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000242 IDA pericentriolar material
GO:0001669 IDA acrosomal vesicle
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005720 IDA nuclear heterochromatin
GO:0005794 IDA Golgi apparatus
GO:0005815 IDA microtubule organizing center
GO:0005832 IDA chaperonin-containing T-complex
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0044053 IMP translocation of peptides or proteins into host cell cytoplasm
GO:0044297 IDA cell body
GO:0051082 IEA unfolded protein binding
GO:1901998 IMP toxin transport
GO:2000109 IMP regulation of macrophage apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321394 TCP1-001 protein_coding Homo_sapiens 0 2039
ENST00000392168 TCP1-004 protein_coding Homo_sapiens 0 2124
ENST00000412860 TCP1P1-001 unprocessed_pseudogene Homo_sapiens 0 1284
ENST00000414406 RP11-405A12.1-001 processed_pseudogene Homo_sapiens 0 1679
ENST00000420894 TCP1-006 protein_coding Homo_sapiens 0 1543
ENST00000504215 CTD-2122P11.1-001 processed_pseudogene Homo_sapiens 0 1118
ENST00000536394 TCP1-014 protein_coding Homo_sapiens 0 274
ENST00000536607 TCP1-013 retained_intron Homo_sapiens 0 206
ENST00000536807 TCP1-017 retained_intron Homo_sapiens 0 564
ENST00000537390 TCP1-007 protein_coding Homo_sapiens 0 363
ENST00000538128 TCP1-008 protein_coding Homo_sapiens 0 294
ENST00000538530 TCP1-012 nonsense_mediated_decay Homo_sapiens 0 717
ENST00000539756 TCP1-011 protein_coding Homo_sapiens 0 824
ENST00000539948 TCP1-015 protein_coding Homo_sapiens 0 449
ENST00000543517 TCP1-010 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000543532 TCP1-009 processed_transcript Homo_sapiens 0 207
ENST00000544255 TCP1-005 protein_coding Homo_sapiens 0 1354
ENST00000545764 TCP1-016 retained_intron Homo_sapiens 0 424

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