C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 9 superfamily protein member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068040 Tm9sf4 10090 + 2:153161303-153210466 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089027 Tm9sf4-001 153161303-153210466 protein_coding
  ENSMUST00000134922 Tm9sf4-009 153194341-153203902 processed_transcript
  ENSMUST00000137446 Tm9sf4-002 153161303-153204862 processed_transcript
  ENSMUST00000140988 Tm9sf4-007 153190399-153192187 retained_intron
  ENSMUST00000141220 Tm9sf4-006 153161541-153189060 processed_transcript
  ENSMUST00000145010 Tm9sf4-008 153190926-153200761 processed_transcript
  ENSMUST00000146477 Tm9sf4-010 153195530-153198917 processed_transcript
  ENSMUST00000147978 Tm9sf4-003 153161548-153193535 retained_intron
  ENSMUST00000149390 Tm9sf4-005 153202134-153210466 retained_intron
  ENSMUST00000152807 Tm9sf4-004 153200248-153210466 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089027ENSMUST00000134922ENSMUST00000137446ENSMUST00000141220ENSMUST00000149390ENSMUST00000152807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089027 19.692±2.73 22.139±3.29 13.664±0.41 16.378±1.24 16.005±2.31 46.658±3.24 11.189±0.42 17.731±1.25 12.279±2.56 16.668±1.93 6.368±0.61 20.264±5.54 17.084±10.17 6.588±3.64
ENSMUST00000134922 N/A 32.699±0.41 N/A 20.913±0.00 N/A N/A N/A N/A N/A N/A N/A 18.192±0.00 17.564±3.97 5.541±0.00
ENSMUST00000137446 6.756±0.00 N/A N/A N/A 7.718±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.863±2.18
ENSMUST00000141220 N/A N/A N/A 12.223±0.00 N/A N/A N/A N/A N/A N/A N/A 11.688±0.00 14.894±3.72 6.639±0.00
ENSMUST00000149390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.148±0.00 N/A N/A
ENSMUST00000152807 N/A N/A N/A 2.781±0.00 3.844±0.78 N/A N/A N/A N/A N/A N/A 2.349±1.40 0.974±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071A CIL_00071A_0003 CGP 2:153108468-153210466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002536 tm9sf4 transmembrane 9 superfamily protein member 4 protein_coding Danio_rerio
ENSG00000101337 TM9SF4 transmembrane 9 superfamily protein member 4 protein_coding Homo_sapiens

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