C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058647-ENSDARG00000002536 CGP 7955 23:7579508-7652457
GeneTranscriptPositionBiotype
ENSDARG00000002536 (tm9sf4)
transmembrane 9 superfamily protein member 4 		ENSDART00000006765 (tm9sf4-001) 7622362-7652457 protein_coding
ENSDART00000011554 (tm9sf4-201) 7622479-7652415 protein_coding
ENSDARG00000058647 (hck)
hemopoietic cell kinase 		ENSDART00000081536 (hck-201) 7591859-7619554 protein_coding
ENSDART00000135787 (hck-001) 7579508-7619525 protein_coding
CIL_00071A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101336-ENSG00000101337 CGP 9606 20:32052188-32167258
GeneTranscriptPositionBiotype
ENSG00000101336 (HCK)
HCK proto-oncogene, Src family tyrosine kinase 		ENST00000262651 (HCK-005) 32052242-32101849 nonsense_mediated_decay
ENST00000375852 (HCK-001) 32052261-32101856 protein_coding
ENST00000375862 (HCK-002) 32052197-32101519 protein_coding
ENST00000470092 (HCK-003) 32052288-32072589 retained_intron
ENST00000486475 (HCK-004) 32052242-32101660 nonsense_mediated_decay
ENST00000518730 (HCK-007) 32052261-32101519 protein_coding
ENST00000520553 (HCK-006) 32052242-32101856 protein_coding
ENST00000534862 (HCK-201) 32052188-32101852 protein_coding
ENST00000538448 (HCK-202) 32052188-32101852 protein_coding
ENSG00000101337 (TM9SF4)
transmembrane 9 superfamily protein member 4 		ENST00000217315 (TM9SF4-001) 32109736-32167258 protein_coding
ENST00000398022 (TM9SF4-002) 32109506-32167258 protein_coding
ENST00000417389 (TM9SF4-007) 32109767-32141606 nonsense_mediated_decay
ENST00000442842 (TM9SF4-006) 32109717-32141785 nonsense_mediated_decay
ENST00000450829 (TM9SF4-005) 32109728-32141827 nonsense_mediated_decay
ENST00000479591 (TM9SF4-008) 32161093-32165587 retained_intron
ENST00000495749 (TM9SF4-004) 32159143-32167258 retained_intron
ENSG00000265736 (AL049539.1)
 ENST00000583886 (AL049539.1-201) 32118654-32118751 miRNA
ENSG00000275576 (RP5-836N17.4)
 ENST00000611964 (RP5-836N17.4-001) 32116171-32116629 sense_intronic
CIL_00071A_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003283-ENSMUSG00000068040 CGP 10090 2:153108468-153210466
GeneTranscriptPositionBiotype
ENSMUSG00000003283 (Hck)
hemopoietic cell kinase 		ENSMUST00000003370 (Hck-002) 153108468-153151441 protein_coding
ENSMUST00000109799 (Hck-001) 153108468-153151441 protein_coding
ENSMUST00000189688 (Hck-201) 153108468-153151439 protein_coding
ENSMUST00000191431 (Hck-202) 153108468-153151439 protein_coding
ENSMUSG00000068040 (Tm9sf4)
transmembrane 9 superfamily protein member 4 		ENSMUST00000089027 (Tm9sf4-001) 153161303-153210466 protein_coding
ENSMUST00000134922 (Tm9sf4-009) 153194341-153203902 processed_transcript
ENSMUST00000137446 (Tm9sf4-002) 153161303-153204862 processed_transcript
ENSMUST00000140988 (Tm9sf4-007) 153190399-153192187 retained_intron
ENSMUST00000141220 (Tm9sf4-006) 153161541-153189060 processed_transcript
ENSMUST00000145010 (Tm9sf4-008) 153190926-153200761 processed_transcript
ENSMUST00000146477 (Tm9sf4-010) 153195530-153198917 processed_transcript
ENSMUST00000147978 (Tm9sf4-003) 153161548-153193535 retained_intron
ENSMUST00000149390 (Tm9sf4-005) 153202134-153210466 retained_intron
ENSMUST00000152807 (Tm9sf4-004) 153200248-153210466 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071A_0001ENSDARG00000002536ENSDART00000006765ENSDART00000011554ENSDARG00000058647ENSDART00000081536ENSDART00000135787CIL_00071A_0002ENSG00000101336ENST00000262651ENST00000375852ENST00000375862ENST00000470092ENST00000486475ENST00000518730ENST00000520553ENST00000534862ENST00000538448ENSG00000101337ENST00000217315ENST00000398022ENST00000417389ENST00000442842ENST00000450829ENST00000479591ENST00000495749ENSG00000265736ENST00000583886ENSG00000275576ENST00000611964CIL_00071A_0003ENSMUSG00000003283ENSMUST00000003370ENSMUST00000109799ENSMUST00000189688ENSMUST00000191431ENSMUSG00000068040ENSMUST00000089027ENSMUST00000134922ENSMUST00000137446ENSMUST00000140988ENSMUST00000141220ENSMUST00000145010ENSMUST00000146477ENSMUST00000147978ENSMUST00000149390ENSMUST00000152807
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071A_0001ENSDARG00000002536ENSDART00000006765ENSDART00000011554ENSDARG00000058647ENSDART00000081536ENSDART00000135787CIL_00071A_0002ENSG00000101336ENST00000262651ENST00000375852ENST00000375862ENST00000486475ENST00000518730ENST00000520553ENST00000534862ENSG00000101337ENST00000217315ENST00000398022ENSG00000265736ENST00000583886ENSG00000275576ENST00000611964CIL_00071A_0003ENSMUSG00000003283ENSMUST00000003370ENSMUST00000191431ENSMUSG00000068040ENSMUST00000089027ENSMUST00000134922ENSMUST00000137446ENSMUST00000141220ENSMUST00000149390ENSMUST00000152807
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002536 ENSDART00000006765 N/A N/A N/A 4.464±0.00 N/A N/A N/A N/A 5.822±0.00 N/A 2.073±0.00 N/A N/A N/A
ENSDART00000011554 N/A N/A N/A 4.522±0.00 N/A N/A N/A 0.308±0.01 2.120±0.00 N/A 1.970±0.00 N/A N/A N/A
ENSDARG00000058647 ENSDART00000081536 N/A N/A N/A 1.485±0.58 N/A N/A 2.208±1.20 2.085±0.00 0.254±0.00 N/A 1.753±0.00 N/A N/A N/A
ENSDART00000135787 N/A N/A N/A 0.959±0.00 N/A N/A 1.376±0.34 8.342±0.00 N/A N/A 0.534±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101336 ENST00000262651 N/A N/A N/A 0.747±0.00 0.540±0.00 N/A 0.077±0.00 N/A 0.413±0.00 N/A N/A N/A N/A 0.682±0.00
ENST00000375852 N/A N/A N/A N/A 1.980±0.00 0.771±0.00 3.728±0.00 0.329±0.00 1.519±0.00 2.761±0.00 0.461±0.00 0.880±0.49 9.594±5.52 N/A
ENST00000375862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00
ENST00000470092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486475 3.242±0.00 8.360±0.00 N/A 2.279±0.00 2.449±0.00 0.756±0.00 N/A N/A N/A 4.946±0.00 N/A N/A N/A 0.702±0.00
ENST00000518730 N/A N/A 0.117±0.00 1.967±0.00 N/A 1.030±0.00 N/A 2.853±0.00 1.039±0.00 3.612±1.13 N/A 1.350±0.32 3.651±0.00 0.807±0.00
ENST00000520553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.864±0.00 10.484±7.39 N/A
ENST00000534862 4.269±0.00 14.502±0.00 N/A 1.914±0.67 1.775±0.00 0.753±0.00 0.381±0.00 0.869±0.00 1.493±0.00 16.464±0.00 N/A 4.157±0.00 3.029±0.00 1.757±0.00
ENST00000538448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101337 ENST00000217315 11.655±0.00 8.857±0.00 N/A 5.636±4.10 8.919±0.00 1.983±0.00 9.309±0.00 7.742±0.00 12.999±0.00 16.072±0.00 14.935±0.00 14.224±7.05 15.924±1.47 7.856±1.35
ENST00000398022 7.072±0.00 8.218±0.00 2.090±0.00 5.914±0.74 7.050±0.62 7.171±1.93 1.766±0.00 7.438±1.54 4.343±0.00 2.664±0.00 N/A 12.430±8.33 12.347±2.65 6.472±4.58
ENST00000417389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265736 ENST00000583886 N/A 1.360±0.00 N/A 0.292±0.00 1.424±0.00 3.285±0.00 N/A 0.281±0.00 0.520±0.00 1.760±0.00 N/A 22.430±0.00 N/A 1.112±0.00
ENSG00000275576 ENST00000611964 N/A 0.264±0.00 0.195±0.00 0.030±0.00 0.475±0.45 0.845±0.00 N/A 0.374±0.00 1.150±0.00 1.245±0.00 N/A 1.854±0.00 N/A 0.184±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003283 ENSMUST00000003370 3.939±2.04 0.935±0.27 0.697±0.00 0.422±0.00 7.587±2.20 3.515±0.23 0.192±0.10 0.343±0.09 2.694±3.60 15.583±3.27 0.085±0.13 2.634±2.08 0.203±0.16 0.066±0.03
ENSMUST00000109799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191431 N/A 0.937±0.27 1.494±0.13 0.345±0.11 5.471±3.97 4.473±1.42 0.438±0.16 1.301±0.52 3.197±3.10 9.839±7.05 0.086±0.13 1.997±1.02 0.328±0.23 0.066±0.03
ENSMUSG00000068040 ENSMUST00000089027 19.692±2.73 22.139±3.29 13.664±0.41 16.378±1.24 16.005±2.31 46.658±3.24 11.189±0.42 17.731±1.25 12.279±2.56 16.668±1.93 6.368±0.61 20.264±5.54 17.084±10.17 6.588±3.64
ENSMUST00000134922 N/A 32.699±0.41 N/A 20.913±0.00 N/A N/A N/A N/A N/A N/A N/A 18.192±0.00 17.564±3.97 5.541±0.00
ENSMUST00000137446 6.756±0.00 N/A N/A N/A 7.718±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.863±2.18
ENSMUST00000140988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141220 N/A N/A N/A 12.223±0.00 N/A N/A N/A N/A N/A N/A N/A 11.688±0.00 14.894±3.72 6.639±0.00
ENSMUST00000145010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.148±0.00 N/A N/A
ENSMUST00000152807 N/A N/A N/A 2.781±0.00 3.844±0.78 N/A N/A N/A N/A N/A N/A 2.349±1.40 0.974±0.00 N/A

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