C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein interacting with C kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068206 Pick1 10090 + 15:79229173-79256674 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018295 Pick1-001 79229382-79249466 protein_coding
  ENSMUST00000053926 Pick1-003 79229391-79256674 protein_coding
  ENSMUST00000113954 Pick1-011 79245274-79247734 processed_transcript
  ENSMUST00000163571 Pick1-002 79229173-79249484 protein_coding
  ENSMUST00000165609 Pick1-004 79229411-79247963 retained_intron
  ENSMUST00000166155 Pick1-012 79229702-79249329 protein_coding
  ENSMUST00000166417 Pick1-006 79229458-79234346 processed_transcript
  ENSMUST00000168513 Pick1-010 79242964-79247632 processed_transcript
  ENSMUST00000169548 Pick1-005 79229416-79247963 retained_intron
  ENSMUST00000171365 Pick1-009 79229505-79241384 retained_intron
  ENSMUST00000171581 Pick1-008 79246335-79249466 processed_transcript
  ENSMUST00000172162 Pick1-007 79244877-79247600 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018295ENSMUST00000163571ENSMUST00000165609ENSMUST00000166155ENSMUST00000168513ENSMUST00000169548ENSMUST00000171365ENSMUST00000171581
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018295 8.149±1.06 8.167±1.03 7.188±1.01 17.270±5.31 6.828±0.90 18.800±2.84 4.654±1.23 8.886±1.28 6.272±1.41 8.382±0.55 15.574±1.06 11.246±1.95 6.186±2.58 28.265±12.20
ENSMUST00000163571 N/A N/A N/A 5.555±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.543±0.00 2.699±0.00
ENSMUST00000165609 N/A N/A N/A N/A 1.608±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166155 N/A N/A 6.259±0.22 8.030±0.00 N/A N/A 5.198±0.95 3.098±0.23 3.158±1.10 N/A N/A 7.340±0.91 3.669±0.61 11.388±2.15
ENSMUST00000168513 N/A N/A N/A 25.552±0.00 N/A N/A N/A N/A N/A N/A N/A 16.634±0.00 8.374±0.05 11.149±0.00
ENSMUST00000169548 N/A N/A N/A N/A N/A N/A N/A N/A 1.457±0.03 N/A N/A 2.725±0.62 1.154±0.00 N/A
ENSMUST00000171365 N/A N/A N/A 20.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.251±0.32 14.958±0.00
ENSMUST00000171581 3.970±1.08 N/A 6.182±0.46 16.117±1.89 4.054±1.18 9.437±1.82 3.700±0.47 4.557±0.45 3.802±1.48 4.860±0.81 4.836±0.56 6.044±1.71 3.602±0.54 5.832±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0003QD CIL_0003QD_0002 CGP 15:79154913-79256674
CIL_0003QE CIL_0003QE_0002 CGP 15:79229173-79256674

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006605 IDA protein targeting
GO:0007205 IEA protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0008022 IEA protein C-terminus binding
GO:0015844 IEA monoamine transport
GO:0019899 IEA enzyme binding
GO:0019904 IEA protein domain specific binding
GO:0030246 IEA carbohydrate binding
GO:0042734 IEA presynaptic membrane
GO:0097481 IDA neuronal postsynaptic density

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071152 pick1 protein interacting with prkca 1 protein_coding Danio_rerio
ENSG00000100151 PICK1 protein interacting with PRKCA 1 protein_coding Homo_sapiens

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