C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein interacting with C kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166155 Pick1-012 ENSMUSG00000068206 10090 + 15:79229702-79249329 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000166155
Transcript ID Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000166155 6.259±0.22 8.030±0.00 5.198±0.95 3.098±0.23 3.158±1.10 7.340±0.91 3.669±0.61 11.388±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0003QD CIL_0003QD_0002 CGP 15:79154913-79256674
CIL_0003QE CIL_0003QE_0002 CGP 15:79229173-79256674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0006605 IDA protein targeting
GO:0019904 IEA protein domain specific binding
GO:0097481 IDA neuronal postsynaptic density

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356976 PICK1-002 protein_coding Homo_sapiens 0 1744
ENST00000404072 PICK1-001 protein_coding Homo_sapiens 0 1746
ENST00000424694 PICK1-005 protein_coding Homo_sapiens 0 985
ENST00000426258 PICK1-013 nonsense_mediated_decay Homo_sapiens 2e-38 163
ENST00000432756 PICK1-010 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000435166 PICK1-009 protein_coding Homo_sapiens 0 640
ENST00000437453 PICK1-016 protein_coding Homo_sapiens 0 553
ENST00000445628 PICK1-004 protein_coding Homo_sapiens 0 228
ENST00000466374 PICK1-012 retained_intron Homo_sapiens 0 551
ENST00000468288 PICK1-007 processed_transcript Homo_sapiens 0 628
ENST00000469819 PICK1-011 retained_intron Homo_sapiens 0 440
ENST00000472724 PICK1-015 retained_intron Homo_sapiens 0 407
ENST00000476157 PICK1-006 retained_intron Homo_sapiens 6e-28 128
ENST00000484021 PICK1-003 retained_intron Homo_sapiens 0 1210
ENST00000494434 PICK1-014 retained_intron Homo_sapiens 0 457

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