C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 16, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068663 Clec16a 10090 + 16:10545339-10744878 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038145 Clec16a-005 10545409-10695728 protein_coding
  ENSMUST00000066345 Clec16a-201 10545339-10744878 protein_coding
  ENSMUST00000115823 Clec16a-003 10600551-10742465 protein_coding
  ENSMUST00000115824 Clec16a-202 10545339-10744878 protein_coding
  ENSMUST00000115827 Clec16a-004 10545398-10721418 protein_coding
  ENSMUST00000115828 Clec16a-002 10545409-10741824 nonsense_mediated_decay
  ENSMUST00000122856 Clec16a-008 10610829-10631589 processed_transcript
  ENSMUST00000130148 Clec16a-007 10545377-10563445 processed_transcript
  ENSMUST00000145866 Clec16a-009 10630060-10641490 processed_transcript
  ENSMUST00000150894 Clec16a-006 10545409-10559738 protein_coding
  ENSMUST00000155633 Clec16a-001 10545364-10744878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066345ENSMUST00000115823ENSMUST00000115827ENSMUST00000115828ENSMUST00000155633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066345 N/A N/A N/A 5.605±2.23 0.917±0.02 N/A 1.512±0.33 N/A N/A N/A 2.544±0.00 N/A N/A N/A
ENSMUST00000115823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.758±1.16
ENSMUST00000115827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.322±0.00
ENSMUST00000115828 N/A N/A N/A N/A 3.186±0.55 3.002±0.63 1.873±0.21 N/A 1.239±0.45 2.795±0.25 N/A 2.397±0.55 N/A N/A
ENSMUST00000155633 3.309±0.21 5.560±2.10 2.692±0.34 2.960±0.91 3.628±0.93 2.569±0.87 1.360±0.57 4.964±1.22 1.515±0.81 3.837±0.38 6.828±1.29 3.863±0.54 2.534±2.05 5.284±2.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059N CIL_00059N_0002 CGP 16:10502531-10744878

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038094 clec16a C-type lectin domain family 16, member A protein_coding Danio_rerio
ENSG00000038532 CLEC16A C-type lectin domain family 16, member A protein_coding Homo_sapiens

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