C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 16, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155633 Clec16a-001 ENSMUSG00000068663 10090 + 16:10545364-10744878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000155633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000155633 3.309±0.21 5.560±2.10 2.692±0.34 2.960±0.91 3.628±0.93 2.569±0.87 1.360±0.57 4.964±1.22 1.515±0.81 3.837±0.38 6.828±1.29 3.863±0.54 2.534±2.05 5.284±2.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059N CIL_00059N_0002 CGP 16:10502531-10744878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000156150 clec16a-001 protein_coding Danio_rerio 0 902
ENSDART00000123609 clec16a-202 protein_coding Danio_rerio 0 606
ENSDART00000123977 clec16a-203 protein_coding Danio_rerio 0 580
ENSDART00000103690 clec16a-201 protein_coding Danio_rerio 0 568
ENST00000409552 CLEC16A-002 protein_coding Homo_sapiens 0 3227
ENST00000409790 CLEC16A-001 protein_coding Homo_sapiens 0 1923
ENST00000465491 CLEC16A-009 processed_transcript Homo_sapiens 0 1254
ENST00000494853 CLEC16A-006 retained_intron Homo_sapiens 0 821

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