C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00059N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182108-ENSG00000038532 CGP 9606 16:10928891-11182189
GeneTranscriptPositionBiotype
ENSG00000038532 (CLEC16A)
C-type lectin domain family 16, member A 		ENST00000261657 (CLEC16A-005) 11123900-11182181 protein_coding
ENST00000409552 (CLEC16A-002) 10944581-11126787 protein_coding
ENST00000409790 (CLEC16A-001) 10944488-11182189 protein_coding
ENST00000428742 (CLEC16A-003) 11123743-11157225 protein_coding
ENST00000436973 (CLEC16A-004) 11123895-11157233 protein_coding
ENST00000459723 (CLEC16A-012) 11126010-11150317 processed_transcript
ENST00000463459 (CLEC16A-011) 11024867-11048512 processed_transcript
ENST00000463896 (CLEC16A-007) 11024153-11048518 retained_intron
ENST00000465491 (CLEC16A-009) 11024480-11123920 processed_transcript
ENST00000476025 (CLEC16A-008) 11024473-11047342 processed_transcript
ENST00000487189 (CLEC16A-010) 11024818-11044222 retained_intron
ENST00000494853 (CLEC16A-006) 10972481-11024919 retained_intron
ENSG00000179583 (CIITA)
class II, major histocompatibility complex, transactivator 		ENST00000324288 (CIITA-001) 10877198-10932281 protein_coding
ENST00000381835 (CIITA-002) 10877210-10924437 protein_coding
ENST00000537380 (CIITA-005) 10877331-10910243 processed_transcript
ENST00000570546 (CIITA-003) 10877210-10924804 retained_intron
ENST00000571186 (CIITA-006) 10877223-10902722 nonsense_mediated_decay
ENST00000571190 (CIITA-007) 10901559-10902037 retained_intron
ENST00000571545 (CIITA-012) 10928164-10932222 processed_transcript
ENST00000572665 (CIITA-009) 10915646-10917010 processed_transcript
ENST00000573309 (CIITA-004) 10877216-10908887 retained_intron
ENST00000575513 (CIITA-010) 10922925-10923992 retained_intron
ENST00000576601 (CIITA-008) 10878969-10902160 protein_coding
ENST00000611587 (CIITA-201) 10877216-10908887 protein_coding
ENST00000618207 (CIITA-202) 10877198-10924983 protein_coding
ENST00000618327 (CIITA-203) 10877198-10924983 protein_coding
ENSG00000182108 (DEXI)
Dexi homolog (mouse) 		ENST00000331808 (DEXI-001) 10928891-10942460 protein_coding
ENST00000469379 (DEXI-002) 10928891-10942131 protein_coding
ENST00000570992 (DEXI-003) 10928942-10941718 processed_transcript
ENSG00000229917 (RPL7P46)
ribosomal protein L7 pseudogene 46 		ENST00000425129 (RPL7P46-001) 11027024-11027763 processed_pseudogene
ENSG00000262020 (RP11-66H6.3)
 ENST00000572828 (RP11-66H6.3-001) 11066496-11071102 antisense
ENSG00000262222 (RP11-876N24.4)
 ENST00000573379 (RP11-876N24.4-001) 10940719-10943021 antisense
ENSG00000263013 (RP11-876N24.5)
 ENST00000570440 (RP11-876N24.5-001) 10938886-10940044 sense_intronic
ENSG00000274038 (RP11-66H6.4)
 ENST00000615581 (RP11-66H6.4-001) 11056556-11057034 sense_intronic
ENSG00000280153 (RP11-876N24.3)
 ENST00000625054 (RP11-876N24.3-001) 10933903-10936280 TEC
CIL_00059N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038055-ENSMUSG00000068663 CGP 10090 16:10502531-10744878
GeneTranscriptPositionBiotype
ENSMUSG00000022504 (Ciita)
class II transactivator 		ENSMUST00000023147 (Ciita-201) 10488178-10527564 protein_coding
ENSMUSG00000038055 (Dexi)
dexamethasone-induced transcript 		ENSMUST00000038281 (Dexi-001) 10530207-10543054 protein_coding
ENSMUST00000183355 (Dexi-003) 10530207-10531809 processed_transcript
ENSMUST00000184863 (Dexi-002) 10502531-10543054 protein_coding
ENSMUSG00000087384 (Gm15558)
predicted gene 15558 		ENSMUST00000126849 (Gm15558-001) 10669248-10683539 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059N_0001ENSG00000038532ENST00000261657ENST00000409552ENST00000409790ENST00000463896ENST00000465491ENST00000494853ENSG00000179583ENST00000324288ENST00000537380ENST00000570546ENST00000611587ENST00000618207ENST00000618327ENSG00000182108ENST00000331808ENST00000469379ENST00000570992ENSG00000229917ENST00000425129ENSG00000262020ENST00000572828ENSG00000262222ENST00000573379ENSG00000263013ENST00000570440ENSG00000274038ENST00000615581ENSG00000280153ENST00000625054CIL_00059N_0002ENSMUSG00000022504ENSMUST00000023147ENSMUSG00000038055ENSMUST00000038281ENSMUST00000183355ENSMUSG00000087384ENSMUST00000126849
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000038532 ENST00000261657 3.419±0.00 1.277±0.00 0.840±0.00 3.144±0.00 0.694±0.00 1.267±0.00 0.284±0.00 4.631±0.00 1.658±0.00 2.496±0.00 0.666±0.00 1.514±0.94 2.804±1.24 N/A
ENST00000409552 N/A N/A 1.608±0.00 N/A N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A N/A
ENST00000409790 N/A N/A N/A 1.382±0.00 N/A N/A N/A N/A 0.500±0.00 1.184±0.00 N/A 0.994±0.00 N/A 5.361±0.00
ENST00000428742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463896 N/A N/A N/A N/A N/A 0.603±0.00 N/A N/A N/A 0.549±0.00 N/A N/A N/A N/A
ENST00000465491 N/A N/A N/A N/A N/A N/A N/A 1.959±0.00 N/A N/A N/A 1.680±0.00 N/A N/A
ENST00000476025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494853 N/A N/A N/A N/A N/A N/A N/A 2.252±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000179583 ENST00000324288 N/A 6.318±0.00 N/A 0.463±0.00 N/A 0.496±0.19 0.505±0.00 N/A N/A N/A 0.234±0.00 0.948±0.29 N/A N/A
ENST00000381835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537380 N/A N/A 4.448±0.00 N/A 4.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570546 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.269±0.00 N/A N/A N/A N/A
ENST00000571186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611587 N/A N/A N/A N/A 1.522±0.00 N/A 0.670±0.00 N/A N/A 2.042±0.00 N/A N/A N/A N/A
ENST00000618207 N/A N/A N/A N/A N/A N/A N/A N/A 1.547±0.00 N/A N/A N/A N/A N/A
ENST00000618327 N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 N/A 4.701±0.00 N/A 0.768±0.00 1.147±0.00 N/A
ENSG00000182108 ENST00000331808 9.154±0.00 38.031±0.00 N/A 7.324±4.11 15.533±0.00 11.567±0.00 12.500±10.52 9.722±6.73 42.012±0.00 19.802±0.00 13.211±7.48 12.682±11.44 9.166±4.11 8.293±5.35
ENST00000469379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.986±0.00 2.839±0.00
ENST00000570992 9.647±0.00 N/A 9.221±0.00 3.157±0.00 N/A 14.437±0.00 19.135±0.00 12.812±2.69 N/A N/A 20.047±0.99 9.974±4.26 13.293±0.59 7.378±3.09
ENSG00000229917 ENST00000425129 N/A 0.122±0.00 0.141±0.00 0.149±0.06 0.167±0.13 0.745±0.00 0.052±0.01 0.020±0.00 0.134±0.06 N/A 0.036±0.00 0.027±0.01 0.160±0.00 0.091±0.07
ENSG00000262020 ENST00000572828 N/A 0.023±0.00 N/A N/A N/A 0.060±0.00 0.065±0.00 N/A N/A N/A N/A 0.119±0.00 N/A 0.076±0.00
ENSG00000262222 ENST00000573379 3.685±0.00 N/A N/A 2.463±1.37 7.600±0.00 4.013±0.00 5.133±4.08 6.684±0.00 10.231±0.00 10.398±0.00 6.052±3.14 1.872±0.00 4.741±2.41 2.774±1.29
ENSG00000263013 ENST00000570440 0.558±0.00 0.718±0.00 0.719±0.00 0.155±0.04 0.544±0.13 0.734±0.26 0.281±0.04 1.272±0.38 0.339±0.16 1.076±0.65 0.486±0.03 0.938±0.46 0.494±0.34 1.059±0.36
ENSG00000274038 ENST00000615581 0.265±0.00 0.205±0.00 N/A N/A 0.546±0.15 N/A 0.038±0.00 0.058±0.00 0.190±0.00 0.774±0.68 N/A 0.063±0.00 N/A 0.219±0.03
ENSG00000280153 ENST00000625054 N/A N/A N/A N/A 1.917±0.00 N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022504 ENSMUST00000023147 2.954±0.00 N/A 1.462±0.20 N/A 13.902±7.62 2.775±0.17 N/A 1.260±0.36 N/A 4.221±1.34 1.474±0.00 1.861±0.38 0.241±0.00 N/A
ENSMUSG00000038055 ENSMUST00000038281 16.969±2.87 25.385±5.07 17.505±0.68 17.188±1.23 23.967±8.19 21.564±1.90 24.254±4.26 15.318±1.11 15.443±11.51 20.134±1.15 23.632±2.09 30.359±8.67 3.914±1.43 5.224±2.30
ENSMUST00000183355 N/A N/A N/A 12.830±0.00 N/A N/A N/A N/A N/A N/A N/A 8.023±0.00 1.899±0.31 0.948±0.00
ENSMUST00000184863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087384 ENSMUST00000126849 0.025±0.01 N/A 0.037±0.00 0.091±0.00 0.044±0.01 0.038±0.01 0.014±0.00 0.030±0.01 0.020±0.01 0.033±0.01 0.031±0.01 0.045±0.02 0.042±0.03 0.035±0.00

Loading