C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: filamin C, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065090 Flnc-002 ENSMUSG00000068699 10090 + 6:29433276-29461849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryTestisENSMUST00000065090
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary Testis
ENSMUST00000065090 3.733±0.82 0.367±0.05 1.037±0.29 6.199±1.53 0.132±0.00 0.953±0.11 4.416±2.73 0.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UF CIL_0005UF_0004 CGP 6:29396309-29461888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 TAS actin binding
GO:0015629 TAS actin cytoskeleton
GO:0030029 TAS actin filament-based process
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000026492 flncb-201 protein_coding Danio_rerio 0 3507
ENST00000295956 FLNB-001 protein_coding Homo_sapiens 0 771
ENST00000325888 FLNC-001 protein_coding Homo_sapiens 0 10150
ENST00000344736 FLNA-010 protein_coding Homo_sapiens 0 1916
ENST00000346177 FLNC-002 protein_coding Homo_sapiens 0 6645
ENST00000358537 FLNB-003 protein_coding Homo_sapiens 0 771
ENST00000360319 FLNA-001 protein_coding Homo_sapiens 0 2224
ENST00000369850 FLNA-002 protein_coding Homo_sapiens 0 2318
ENST00000369856 FLNA-022 protein_coding Homo_sapiens 0 2318
ENST00000388853 FLNC-003 retained_intron Homo_sapiens 0 514
ENST00000420627 FLNA-021 nonsense_mediated_decay Homo_sapiens 0 2305
ENST00000422373 FLNA-201 protein_coding Homo_sapiens 0 2224
ENST00000429972 FLNB-005 protein_coding Homo_sapiens 0 771
ENST00000466319 FLNA-005 processed_transcript Homo_sapiens 6e-37 158
ENST00000468939 FLNB-012 retained_intron Homo_sapiens 0 257
ENST00000469533 RP11-309L24.6-001 unprocessed_pseudogene Homo_sapiens 0 505
ENST00000481470 FLNB-006 retained_intron Homo_sapiens 0 527
ENST00000490882 FLNB-002 protein_coding Homo_sapiens 0 771
ENST00000490936 FLNA-003 retained_intron Homo_sapiens 0 726
ENST00000493452 FLNB-009 protein_coding Homo_sapiens 0 538
ENST00000610817 FLNA-202 protein_coding Homo_sapiens 0 2170

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