C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069094 Pde7a 10090 - 3:19223108-19311322 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000091314 Pde7a-002 19224682-19265008 protein_coding
  ENSMUST00000099195 Pde7a-001 19223108-19311322 protein_coding
  ENSMUST00000121951 Pde7a-006 19236449-19264965 protein_coding
  ENSMUST00000129060 Pde7a-004 19256694-19311304 retained_intron
  ENSMUST00000139426 Pde7a-008 19227722-19233529 processed_transcript
  ENSMUST00000141621 Pde7a-009 19227385-19230028 retained_intron
  ENSMUST00000143120 Pde7a-005 19256792-19310903 processed_transcript
  ENSMUST00000148590 Pde7a-010 19230361-19236497 retained_intron
  ENSMUST00000149081 Pde7a-007 19230289-19260241 nonsense_mediated_decay
  ENSMUST00000156652 Pde7a-003 19233805-19311052 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091314ENSMUST00000099195ENSMUST00000129060ENSMUST00000139426ENSMUST00000148590ENSMUST00000156652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091314 5.340±1.03 7.241±2.73 1.491±0.28 7.078±4.36 4.979±1.16 3.720±0.82 3.095±0.50 3.282±0.46 0.940±0.49 5.360±1.21 5.195±1.18 2.513±0.54 2.586±0.78 4.469±0.29
ENSMUST00000099195 1.914±0.68 2.224±1.63 1.997±0.80 6.795±4.09 1.191±0.26 4.431±0.95 1.519±0.00 1.364±0.27 1.145±0.78 1.896±0.77 4.713±0.00 2.054±0.66 1.614±0.95 1.629±0.14
ENSMUST00000129060 N/A 7.979±2.36 N/A N/A 3.049±0.42 9.258±3.20 N/A N/A 0.690±0.16 N/A N/A 5.171±1.89 N/A N/A
ENSMUST00000139426 N/A N/A N/A 25.288±0.00 N/A N/A N/A N/A N/A N/A N/A 44.071±0.00 55.173±3.10 82.731±0.00
ENSMUST00000148590 N/A N/A N/A N/A N/A N/A N/A N/A 0.578±0.00 6.215±0.00 N/A N/A N/A N/A
ENSMUST00000156652 N/A N/A N/A N/A N/A N/A N/A N/A 0.913±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LR CIL_0005LR_0003 CGP 3:19187327-19311322
CIL_0007EF CIL_0007EF_0003 CGP 3:19223108-19610862

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004115 ISO 3',5'-cyclic-AMP phosphodiesterase activity
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0008152 ISO metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045305 pde7a phosphodiesterase 7A protein_coding Danio_rerio
ENSG00000205268 PDE7A phosphodiesterase 7A protein_coding Homo_sapiens

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