C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099195 Pde7a-001 ENSMUSG00000069094 10090 - 3:19223108-19311322 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099195 1.914±0.68 2.224±1.63 1.997±0.80 6.795±4.09 1.191±0.26 4.431±0.95 1.519±0.00 1.364±0.27 1.145±0.78 1.896±0.77 4.713±0.00 2.054±0.66 1.614±0.95 1.629±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LR CIL_0005LR_0003 CGP 3:19187327-19311322
CIL_0007EF CIL_0007EF_0003 CGP 3:19223108-19610862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004115 ISO 3',5'-cyclic-AMP phosphodiesterase activity
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0008152 ISO metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124317 pde7a-201 protein_coding Danio_rerio 0.0000007 62
ENSDART00000138741 pde7a-001 protein_coding Danio_rerio 0.0000007 62
ENST00000379419 PDE7A-003 protein_coding Homo_sapiens 0 2170
ENST00000396642 PDE7A-004 protein_coding Homo_sapiens 0 1657
ENST00000401827 PDE7A-001 protein_coding Homo_sapiens 0 3223
ENST00000518352 MTFR1-014 retained_intron Homo_sapiens 3e-40 169
ENST00000518667 PDE7A-008 processed_transcript Homo_sapiens 0 566
ENST00000519231 PDE7A-006 processed_transcript Homo_sapiens 0 255
ENST00000519626 PDE7A-007 processed_transcript Homo_sapiens 0 387
ENST00000520398 MTFR1-016 processed_transcript Homo_sapiens 5e-32 141
ENST00000521247 MTFR1-019 protein_coding Homo_sapiens 1e-31 141
ENST00000522220 PDE7A-009 retained_intron Homo_sapiens 0 287
ENST00000523158 MTFR1-015 processed_transcript Homo_sapiens 7e-32 141
ENST00000523253 PDE7A-005 protein_coding Homo_sapiens 0 246
ENST00000600532 AC005794.1-001 processed_pseudogene Homo_sapiens 0 244

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