C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091314 Pde7a-002 ENSMUSG00000069094 10090 - 3:19224682-19265008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091314
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091314 5.340±1.03 7.241±2.73 1.491±0.28 7.078±4.36 4.979±1.16 3.720±0.82 3.095±0.50 3.282±0.46 0.940±0.49 5.360±1.21 5.195±1.18 2.513±0.54 2.586±0.78 4.469±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LR CIL_0005LR_0003 CGP 3:19187327-19311322
CIL_0007EF CIL_0007EF_0003 CGP 3:19223108-19610862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004115 ISO 3',5'-cyclic-AMP phosphodiesterase activity
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0008152 ISO metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124317 pde7a-201 protein_coding Danio_rerio 0.0000005 62
ENSDART00000138741 pde7a-001 protein_coding Danio_rerio 0.0000005 62
ENST00000379419 PDE7A-003 protein_coding Homo_sapiens 0 2270
ENST00000396642 PDE7A-004 protein_coding Homo_sapiens 0 1448
ENST00000401827 PDE7A-001 protein_coding Homo_sapiens 0 2928
ENST00000518352 MTFR1-014 retained_intron Homo_sapiens 3e-40 169
ENST00000518667 PDE7A-008 processed_transcript Homo_sapiens 0 566
ENST00000519231 PDE7A-006 processed_transcript Homo_sapiens 1e-20 104
ENST00000519626 PDE7A-007 processed_transcript Homo_sapiens 0 233
ENST00000520398 MTFR1-016 processed_transcript Homo_sapiens 5e-32 141
ENST00000521247 MTFR1-019 protein_coding Homo_sapiens 1e-31 141
ENST00000522220 PDE7A-009 retained_intron Homo_sapiens 0 287
ENST00000523158 MTFR1-015 processed_transcript Homo_sapiens 7e-32 141
ENST00000523253 PDE7A-005 protein_coding Homo_sapiens 0 346

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