C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177111 Itgad-003 ENSMUSG00000070369 10090 + 7:128173955-128205501 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonLiverOvaryPlacentaTestisENSMUST00000177111
Transcript ID Adipose Adrenal Bladder Breast Colon Liver Ovary Placenta Testis
ENSMUST00000177111 0.111±0.02 0.048±0.01 0.041±0.00 0.215±0.00 0.075±0.03 0.023±0.02 0.086±0.06 0.180±0.00 0.454±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035N CIL_00035N_0002 CGP 7:128129547-128223816
CIL_000436 CIL_000436_0002 CGP 7:128154376-128223816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0050798 IMP activated T cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389202 ITGAD-001 protein_coding Homo_sapiens 0 2549
ENST00000444228 ITGAD-003 retained_intron Homo_sapiens 0 656

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