C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UBX domain protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071655 Ubxn1 10090 + 19:8871559-8875663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096255 Ubxn1-201 8871643-8875663 protein_coding
  ENSMUST00000166407 Ubxn1-202 8871559-8875655 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096255ENSMUST00000166407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096255 13.797±3.34 50.031±11.44 27.187±10.98 28.157±32.40 17.575±6.32 16.137±3.73 11.294±0.41 22.138±11.42 17.344±5.70 10.901±1.36 26.478±8.59 38.650±45.59 94.121±71.20 15.473±7.86
ENSMUST00000166407 37.354±2.48 43.710±9.15 49.249±8.68 37.281±25.95 45.753±5.23 49.970±3.11 20.028±4.18 44.815±7.08 41.873±12.24 42.364±3.16 81.705±14.39 64.563±40.33 216.922±156.08 75.127±71.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0030425 IEA dendrite
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031593 IEA polyubiquitin binding
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032435 ISS negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034098 IEA Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0043025 IEA neuronal cell body
GO:0043130 IEA ubiquitin binding
GO:0051117 IEA ATPase binding
GO:0071796 ISS K6-linked polyubiquitin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086797 ubxn1 UBX domain protein 1 protein_coding Danio_rerio
ENSDARG00000090309 ubxn1 UBX domain protein 1 protein_coding Danio_rerio
ENSG00000162191 UBXN1 UBX domain protein 1 protein_coding Homo_sapiens

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