C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166407 Ubxn1-202 ENSMUSG00000071655 10090 + 19:8871559-8875655 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166407 37.354±2.48 43.710±9.15 49.249±8.68 37.281±25.95 45.753±5.23 49.970±3.11 20.028±4.18 44.815±7.08 41.873±12.24 42.364±3.16 81.705±14.39 64.563±40.33 216.922±156.08 75.127±71.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0032435 ISS negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0071796 ISS K6-linked polyubiquitin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294119 UBXN1-001 protein_coding Homo_sapiens 0 1031
ENST00000301935 UBXN1-002 protein_coding Homo_sapiens 0 1175
ENST00000436354 UBXN1-008 retained_intron Homo_sapiens 0 383
ENST00000524762 UBXN1-015 processed_transcript Homo_sapiens 0 645
ENST00000525004 UBXN1-016 processed_transcript Homo_sapiens 0 254
ENST00000525717 UBXN1-005 retained_intron Homo_sapiens 0 647
ENST00000526919 UBXN1-014 retained_intron Homo_sapiens 0 647
ENST00000527421 UBXN1-012 retained_intron Homo_sapiens 0 536
ENST00000528907 UBXN1-011 retained_intron Homo_sapiens 0 383
ENST00000529640 UBXN1-010 protein_coding Homo_sapiens 0 1109
ENST00000531056 UBXN1-013 retained_intron Homo_sapiens 0 322
ENST00000531625 UBXN1-007 retained_intron Homo_sapiens 0 211
ENST00000532904 UBXN1-003 retained_intron Homo_sapiens 0 536
ENST00000533000 UBXN1-017 protein_coding Homo_sapiens 0 270
ENST00000533476 UBXN1-004 retained_intron Homo_sapiens 0 536
ENST00000533908 UBXN1-009 retained_intron Homo_sapiens 0 577
ENST00000534176 UBXN1-006 protein_coding Homo_sapiens 0 1074
ENST00000616865 UBXN1-201 protein_coding Homo_sapiens 0 797

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