C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peptidyl-tRNA hydrolase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072582 Ptrh2 10090 + 11:86683985-86692457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108021 Ptrh2-002 86683985-86692457 protein_coding
  ENSMUST00000108022 Ptrh2-001 86683985-86692457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108021ENSMUST00000108022
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108021 0.270±0.00 N/A N/A N/A N/A 0.497±0.10 0.193±0.00 0.477±0.16 N/A N/A N/A 0.508±0.09 0.387±0.13 0.242±0.00
ENSMUST00000108022 4.209±1.40 9.450±2.66 5.509±0.26 6.281±4.10 3.278±0.57 3.123±0.67 1.950±0.36 3.371±0.51 7.303±3.26 3.174±0.18 2.457±0.11 5.420±1.17 4.252±2.01 2.211±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VS CIL_0008VS_0002 VISTA 11:86270110-86871719
CIL_0008Y2 CIL_0008Y2_0002 VISTA 11:86286196-86887829
CIL_00081F CIL_00081F_0002 VISTA 11:86323484-86925483
CIL_0004QV CIL_0004QV_0002 CGP 11:86683985-86757565

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004045 IEA aminoacyl-tRNA hydrolase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005829 IEA cytosol
GO:0008152 IEA metabolic process
GO:0010629 IEA negative regulation of gene expression
GO:0016020 IEA membrane
GO:2000210 IEA positive regulation of anoikis
GO:2000811 IEA negative regulation of anoikis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077339 ptrh2 peptidyl-tRNA hydrolase 2 protein_coding Danio_rerio
ENSG00000141378 PTRH2 peptidyl-tRNA hydrolase 2 protein_coding Homo_sapiens

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