C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidyl-tRNA hydrolase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108021 Ptrh2-002 ENSMUSG00000072582 10090 + 11:86683985-86692457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyOvaryPlacentaTestisENSMUST00000108021
Transcript ID Adipose Colon Heart Kidney Ovary Placenta Testis
ENSMUST00000108021 0.270±0.00 0.497±0.10 0.193±0.00 0.477±0.16 0.508±0.09 0.387±0.13 0.242±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VS CIL_0008VS_0002 VISTA 11:86270110-86871719
CIL_0008Y2 CIL_0008Y2_0002 VISTA 11:86286196-86887829
CIL_00081F CIL_00081F_0002 VISTA 11:86323484-86925483
CIL_0004QV CIL_0004QV_0002 CGP 11:86683985-86757565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004045 IEA aminoacyl-tRNA hydrolase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005829 IEA cytosol
GO:0008152 IEA metabolic process
GO:0010629 IEA negative regulation of gene expression
GO:0016020 IEA membrane
GO:2000210 IEA positive regulation of anoikis
GO:2000811 IEA negative regulation of anoikis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393038 PTRH2-001 protein_coding Homo_sapiens 0 545
ENST00000409433 PTRH2-002 protein_coding Homo_sapiens 0 551
ENST00000470557 PTRH2-003 protein_coding Homo_sapiens 0 545

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