C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidyl-tRNA hydrolase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108022 Ptrh2-001 ENSMUSG00000072582 10090 + 11:86683985-86692457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108022
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108022 4.209±1.40 9.450±2.66 5.509±0.26 6.281±4.10 3.278±0.57 3.123±0.67 1.950±0.36 3.371±0.51 7.303±3.26 3.174±0.18 2.457±0.11 5.420±1.17 4.252±2.01 2.211±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VS CIL_0008VS_0002 VISTA 11:86270110-86871719
CIL_0008Y2 CIL_0008Y2_0002 VISTA 11:86286196-86887829
CIL_00081F CIL_00081F_0002 VISTA 11:86323484-86925483
CIL_0004QV CIL_0004QV_0002 CGP 11:86683985-86757565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004045 IEA aminoacyl-tRNA hydrolase activity
GO:0005739 IDA mitochondrion
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393038 PTRH2-001 protein_coding Homo_sapiens 0 549
ENST00000409433 PTRH2-002 protein_coding Homo_sapiens 0 545
ENST00000470557 PTRH2-003 protein_coding Homo_sapiens 0 547

Loading