C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: post-GPI attachment to proteins 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073678 Pgap1 10090 - 1:54472994-54557684 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097739 Pgap1-001 54472994-54557682 protein_coding
  ENSMUST00000185817 Pgap1-004 54524284-54557684 retained_intron
  ENSMUST00000187949 Pgap1-003 54526200-54529446 retained_intron
  ENSMUST00000189506 Pgap1-002 54554603-54557627 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097739ENSMUST00000185817ENSMUST00000189506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097739 0.737±0.29 0.336±0.05 3.444±0.02 5.933±3.10 1.382±0.49 1.332±0.37 0.421±0.03 1.768±0.41 1.116±0.66 0.939±0.08 0.283±0.07 0.570±0.14 0.990±0.70 0.585±0.30
ENSMUST00000185817 N/A 0.609±0.00 N/A N/A N/A 1.738±0.00 N/A N/A N/A N/A N/A 0.900±0.14 N/A N/A
ENSMUST00000189506 N/A 0.101±0.00 N/A N/A 0.649±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KE CIL_0002KE_0002 CGP 1:54472994-54926387

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004518 ISS nuclease activity
GO:0005783 ISS endoplasmic reticulum
GO:0006506 IEA GPI anchor biosynthetic process
GO:0006886 IEA intracellular protein transport
GO:0007605 IMP sensory perception of sound
GO:0009880 IGI embryonic pattern specification
GO:0009948 IGI anterior/posterior axis specification
GO:0015798 ISS myo-inositol transport
GO:0016021 IEA integral component of membrane
GO:0021871 IGI forebrain regionalization
GO:0042578 ISS phosphoric ester hydrolase activity
GO:0060322 IGI head development
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062465 pgap1 post-GPI attachment to proteins 1 protein_coding Danio_rerio
ENSG00000197121 PGAP1 post-GPI attachment to proteins 1 protein_coding Homo_sapiens

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