C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: post-GPI attachment to proteins 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185817 Pgap1-004 ENSMUSG00000073678 10090 - 1:54524284-54557684 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000185817
Transcript ID Adrenal Colon Ovary
ENSMUST00000185817 0.609±0.00 1.738±0.00 0.900±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KE CIL_0002KE_0002 CGP 1:54472994-54926387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354764 PGAP1-001 protein_coding Homo_sapiens 0 1749
ENST00000374738 PGAP1-011 protein_coding Homo_sapiens 0 549
ENST00000409188 PGAP1-006 protein_coding Homo_sapiens 0 1221
ENST00000409475 PGAP1-005 protein_coding Homo_sapiens 0 1749
ENST00000423035 PGAP1-002 nonsense_mediated_decay Homo_sapiens 0 1544
ENST00000470179 PGAP1-004 retained_intron Homo_sapiens 0 634
ENST00000482051 PGAP1-010 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000485830 PGAP1-007 processed_transcript Homo_sapiens 0 1221

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