C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L31
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073702 Rpl31 10090 + 1:39367851-39371908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086535 Rpl31-201 39367851-39371908 protein_coding
  ENSMUST00000178079 Rpl31-202 39367851-39371908 protein_coding
  ENSMUST00000179954 Rpl31-203 39367851-39371908 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086535ENSMUST00000178079ENSMUST00000179954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086535 47.623±11.31 N/A 529.499±27.34 142.116±95.99 44.491±13.32 57.226±24.60 34.580±7.47 60.122±13.48 239.622±236.28 41.529±9.07 102.981±7.29 80.971±92.62 234.526±213.63 35.402±16.52
ENSMUST00000178079 N/A N/A N/A 5.747±0.00 N/A N/A N/A N/A 10.505±1.34 N/A N/A N/A N/A 9.752±4.44
ENSMUST00000179954 11.653±0.00 11.096±2.16 N/A N/A 9.803±0.12 10.668±0.90 N/A 6.387±0.00 N/A N/A N/A 14.205±1.12 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0002 VISTA 1:39141367-39744845
CIL_0004HI CIL_0004HI_0002 CGP 1:39193731-39371908
CIL_0004HF CIL_0004HF_0002 CGP 1:39367851-39478747

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053365 rpl31 ribosomal protein L31 protein_coding Danio_rerio
ENSG00000071082 RPL31 ribosomal protein L31 protein_coding Homo_sapiens

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