C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain containing 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097891 Sh3d21-001 ENSMUSG00000073758 10090 - 4:126150602-126163491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000097891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000097891 0.608±0.20 0.459±0.34 1.775±0.23 0.089±0.04 0.415±0.23 9.429±1.66 0.183±0.06 1.355±0.24 0.209±0.17 0.973±0.28 0.192±0.09 0.563±0.36 5.092±5.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JS CIL_0002JS_0002 CGP 4:126147744-126163491
CIL_0000FN CIL_0000FN_0002 CGP 4:126150602-126202760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373139 SH3D21-003 protein_coding Homo_sapiens 0 869
ENST00000453908 SH3D21-201 protein_coding Homo_sapiens 0 869
ENST00000480549 SH3D21-001 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000505871 SH3D21-005 protein_coding Homo_sapiens 0 708

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