C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amylase 1, salivary
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074264 Amy1 10090 - 3:113555710-113606699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067980 Amy1-001 113555710-113577830 protein_coding
  ENSMUST00000106540 Amy1-002 113555953-113574762 protein_coding
  ENSMUST00000142505 Amy1-003 113562690-113574272 protein_coding
  ENSMUST00000172885 Amy1-005 113556149-113562018 retained_intron
  ENSMUST00000174147 Amy1-004 113564987-113606699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106540ENSMUST00000142505
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106540 24.525±10.13 6.137±0.16 3.780±0.07 7.246±0.00 25.285±13.58 1.958±0.54 2.334±0.82 21.816±15.06 1.901±0.00 9.963±1.53 12.734±4.68 1.875±0.00 2.926±1.29
ENSMUST00000142505 26.316±6.63 N/A N/A 38.431±0.00 21.317±7.56 2.591±0.00 2.423±0.18 21.167±6.45 N/A N/A 14.532±10.88 N/A 7.571±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I9 CIL_0005I9_0005 CGP 3:113529403-113606699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004556 IEA alpha-amylase activity
GO:0005615 IDA extracellular space
GO:0016160 IDA amylase activity
GO:0043169 IEA cation binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009443 zgc:92137 zgc:92137 protein_coding Danio_rerio
ENSDARG00000013856 amy2a amylase, alpha 2A; pancreatic protein_coding Danio_rerio
ENSDARG00000030357 zgc:66313 zgc:66313 protein_coding Danio_rerio
ENSG00000174876 AMY1B amylase, alpha 1B (salivary) protein_coding Homo_sapiens
ENSG00000187733 AMY1C amylase, alpha 1C (salivary) protein_coding Homo_sapiens
ENSG00000237763 AMY1A amylase, alpha 1A (salivary) protein_coding Homo_sapiens
ENSG00000240038 AMY2B amylase, alpha 2B (pancreatic) protein_coding Homo_sapiens
ENSG00000243480 AMY2A amylase, alpha 2A (pancreatic) protein_coding Homo_sapiens

Loading