C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylase 1, salivary
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142505 Amy1-003 ENSMUSG00000074264 10090 - 3:113562690-113574272 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverOvaryTestisENSMUST00000142505
Transcript ID Adipose Brain Breast Heart Kidney Liver Ovary Testis
ENSMUST00000142505 26.316±6.63 38.431±0.00 21.317±7.56 2.591±0.00 2.423±0.18 21.167±6.45 14.532±10.88 7.571±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I9 CIL_0005I9_0005 CGP 3:113529403-113606699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004556 IEA alpha-amylase activity
GO:0005615 IDA extracellular space
GO:0016160 IDA amylase activity
GO:0043169 IEA cation binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330330 AMY1B-201 protein_coding Homo_sapiens 0 726
ENST00000361355 AMY2B-001 protein_coding Homo_sapiens 0 754
ENST00000370079 AMY1C-001 protein_coding Homo_sapiens 0 730
ENST00000370080 AMY1B-001 protein_coding Homo_sapiens 0 726
ENST00000370083 AMY1A-001 protein_coding Homo_sapiens 0 726
ENST00000414303 AMY2A-001 protein_coding Homo_sapiens 0 736
ENST00000430659 AMY1A-002 protein_coding Homo_sapiens 0 612
ENST00000440059 AMYP1-001 unprocessed_pseudogene Homo_sapiens 0 320
ENST00000446703 AMY1B-002 protein_coding Homo_sapiens 0 612
ENST00000461518 AMY1A-004 retained_intron Homo_sapiens 0 595
ENST00000464691 AMY1B-004 processed_transcript Homo_sapiens 0 595
ENST00000477657 AMY2B-002 nonsense_mediated_decay Homo_sapiens 0 754
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 758
ENST00000610592 AMY1A-201 protein_coding Homo_sapiens 0 664
ENST00000610648 AMY2B-201 protein_coding Homo_sapiens 0 754
ENST00000622339 AMY2A-201 protein_coding Homo_sapiens 0 732

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