C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylase 1, salivary
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106540 Amy1-002 ENSMUSG00000074264 10090 - 3:113555953-113574762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106540
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106540 24.525±10.13 6.137±0.16 3.780±0.07 7.246±0.00 25.285±13.58 1.958±0.54 2.334±0.82 21.816±15.06 1.901±0.00 9.963±1.53 12.734±4.68 1.875±0.00 2.926±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I9 CIL_0005I9_0005 CGP 3:113529403-113606699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004556 IEA alpha-amylase activity
GO:0005615 IDA extracellular space
GO:0016160 IDA amylase activity
GO:0043169 IEA cation binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330330 AMY1B-201 protein_coding Homo_sapiens 0 1495
ENST00000361355 AMY2B-001 protein_coding Homo_sapiens 0 1524
ENST00000370079 AMY1C-001 protein_coding Homo_sapiens 0 1495
ENST00000370080 AMY1B-001 protein_coding Homo_sapiens 0 1495
ENST00000370083 AMY1A-001 protein_coding Homo_sapiens 0 1495
ENST00000414303 AMY2A-001 protein_coding Homo_sapiens 0 1472
ENST00000430659 AMY1A-002 protein_coding Homo_sapiens 0 612
ENST00000440059 AMYP1-001 unprocessed_pseudogene Homo_sapiens 0 1037
ENST00000446703 AMY1B-002 protein_coding Homo_sapiens 0 612
ENST00000461518 AMY1A-004 retained_intron Homo_sapiens 0 662
ENST00000464691 AMY1B-004 processed_transcript Homo_sapiens 0 662
ENST00000477657 AMY2B-002 nonsense_mediated_decay Homo_sapiens 0 1072
ENST00000481821 AMY2B-007 processed_transcript Homo_sapiens 0 331
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 1070
ENST00000494409 AMY1A-005 processed_transcript Homo_sapiens 0 200
ENST00000610592 AMY1A-201 protein_coding Homo_sapiens 0 660
ENST00000610648 AMY2B-201 protein_coding Homo_sapiens 0 1526
ENST00000622339 AMY2A-201 protein_coding Homo_sapiens 0 1474

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