C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005I9_0001 (Click to Hide/Show)
Notice (8): Undefined index: CIL_0005I9_0001 [APP/View/Region/show.ctp, line 46]
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
ENSG00000174876-ENSG00000187733 CGP 9606 1:103687415-103758690
GeneTranscriptPositionBiotype

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CIL_0005I9_0002 (Click to Hide/Show)
Notice (8): Undefined index: CIL_0005I9_0002 [APP/View/Region/show.ctp, line 46]
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
ENSG00000237763-ENSG00000237763 CGP 9606 1:103655290-103752946
GeneTranscriptPositionBiotype

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CIL_0005I9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000240038-ENSG00000243480 CGP 9606 1:103553815-103625780
GeneTranscriptPositionBiotype
ENSG00000185946 (RNPC3)
RNA-binding region (RNP1, RRM) containing 3
ENST00000423855 (RNPC3-008) 103525971-103555239 protein_coding
ENST00000524631 (RNPC3-001) 103525691-103553343 protein_coding
ENST00000524641 (RNPC3-006) 103541361-103547035 protein_coding
ENST00000525323 (RNPC3-007) 103546927-103551263 retained_intron
ENST00000527062 (RNPC3-005) 103525757-103541475 protein_coding
ENST00000531883 (RNPC3-004) 103525697-103535441 protein_coding
ENST00000532117 (RNPC3-009) 103551724-103553714 nonsense_mediated_decay
ENST00000533099 (RNPC3-003) 103525699-103555112 protein_coding
ENST00000533834 (RNPC3-002) 103537388-103552778 retained_intron
ENSG00000240038 (AMY2B)
amylase, alpha 2B (pancreatic)
ENST00000361355 (AMY2B-001) 103554700-103579529 protein_coding
ENST00000435302 (AMY2B-004) 103561757-103572229 protein_coding
ENST00000453959 (AMY2B-005) 103565031-103572200 protein_coding
ENST00000462971 (AMY2B-006) 103575315-103575781 processed_transcript
ENST00000477657 (AMY2B-002) 103553815-103579530 nonsense_mediated_decay
ENST00000481821 (AMY2B-007) 103577387-103579534 processed_transcript
ENST00000491397 (AMY2B-003) 103568334-103579530 processed_transcript
ENST00000610648 (AMY2B-201) 103571100-103579530 protein_coding
ENSG00000243480 (AMY2A)
amylase, alpha 2A (pancreatic)
ENST00000414303 (AMY2A-001) 103617377-103625780 protein_coding
ENST00000423678 (AMY2A-002) 103617446-103620668 protein_coding
ENST00000497748 (AMY2A-003) 103621562-103625605 processed_transcript
ENST00000622339 (AMY2A-201) 103616811-103625777 protein_coding

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CIL_0005I9_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243480-ENSG00000237763 CGP 9606 1:103616811-103752946
GeneTranscriptPositionBiotype
ENSG00000243480 (AMY2A)
amylase, alpha 2A (pancreatic)
ENST00000414303 (AMY2A-001) 103617377-103625780 protein_coding
ENST00000423678 (AMY2A-002) 103617446-103620668 protein_coding
ENST00000497748 (AMY2A-003) 103621562-103625605 processed_transcript
ENST00000622339 (AMY2A-201) 103616811-103625777 protein_coding

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CIL_0005I9_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070360-ENSMUSG00000074264 CGP 10090 3:113529403-113606699
GeneTranscriptPositionBiotype
ENSMUSG00000027981 (Rnpc3)
RNA-binding region (RNP1, RRM) containing 3
ENSMUST00000092154 (Rnpc3-001) 113605067-113630149 protein_coding
ENSMUST00000106535 (Rnpc3-002) 113606336-113630149 protein_coding
ENSMUST00000106536 (Rnpc3-003) 113605464-113630149 protein_coding
ENSMUST00000123232 (Rnpc3-006) 113616553-113621965 processed_transcript
ENSMUST00000127068 (Rnpc3-004) 113627078-113630079 retained_intron
ENSMUST00000132220 (Rnpc3-008) 113611133-113615440 processed_transcript
ENSMUST00000135712 (Rnpc3-007) 113616802-113621316 processed_transcript
ENSMUST00000153853 (Rnpc3-005) 113605067-113629900 protein_coding
ENSMUSG00000070360 (Amy2a1)
amylase 2a1
ENSMUST00000132353 (Amy2a1-001) 113529403-113532428 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0005I9_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074268-ENSMUSG00000096770 CGP 10090 3:113249176-113291449
GeneTranscriptPositionBiotype
ENSMUSG00000074268 (Amy2a5)
amylase 2a5
ENSMUST00000098673 (Amy2a5-001) 113249176-113258837 protein_coding
ENSMUST00000144352 (Amy2a5-002) 113257780-113258651 retained_intron
ENSMUSG00000096770 (Amy2a4)
amylase 2a4
ENSMUST00000179568 (Amy2a4-001) 113281843-113291449 protein_coding

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CIL_0005I9_0007 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000093931-ENSMUSG00000096569 CGP 10090 3:113314455-113356658
GeneTranscriptPositionBiotype
ENSMUSG00000093931 (Amy2a3)
amylase 2a3
ENSMUST00000179314 (Amy2a3-001) 113314455-113324052 protein_coding
ENSMUSG00000096569 (Amy2a2)
amylase 2a2
ENSMUST00000098667 (Amy2a2-001) 113347055-113356658 protein_coding

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CIL_0005I9_0008 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096569-ENSMUSG00000070360 CGP 10090 3:113347055-113532428
GeneTranscriptPositionBiotype
ENSMUSG00000070360 (Amy2a1)
amylase 2a1
ENSMUST00000132353 (Amy2a1-001) 113529403-113532428 protein_coding
ENSMUSG00000096569 (Amy2a2)
amylase 2a2
ENSMUST00000098667 (Amy2a2-001) 113347055-113356658 protein_coding

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CIL_0005I9_0009 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096770-ENSMUSG00000093931 CGP 10090 3:113281843-113324052
GeneTranscriptPositionBiotype
ENSMUSG00000093931 (Amy2a3)
amylase 2a3
ENSMUST00000179314 (Amy2a3-001) 113314455-113324052 protein_coding
ENSMUSG00000096770 (Amy2a4)
amylase 2a4
ENSMUST00000179568 (Amy2a4-001) 113281843-113291449 protein_coding

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005I9_0003ENSG00000185946ENST00000423855ENST00000524631ENST00000524641ENST00000525323ENST00000527062ENST00000531883ENST00000532117ENST00000533099ENST00000533834ENSG00000240038ENST00000361355ENST00000435302ENST00000453959ENST00000462971ENST00000477657ENST00000481821ENST00000491397ENST00000610648ENSG00000243480ENST00000414303ENST00000423678ENST00000497748ENST00000622339CIL_0005I9_0004ENSG00000243480ENST00000414303ENST00000423678ENST00000497748ENST00000622339CIL_0005I9_0005ENSMUSG00000027981ENSMUST00000092154ENSMUST00000106535ENSMUST00000106536ENSMUST00000123232ENSMUST00000127068ENSMUST00000132220ENSMUST00000135712ENSMUST00000153853ENSMUSG00000070360ENSMUST00000132353CIL_0005I9_0006ENSMUSG00000074268ENSMUST00000098673ENSMUST00000144352ENSMUSG00000096770ENSMUST00000179568CIL_0005I9_0007ENSMUSG00000093931ENSMUST00000179314ENSMUSG00000096569ENSMUST00000098667CIL_0005I9_0008ENSMUSG00000070360ENSMUST00000132353ENSMUSG00000096569ENSMUST00000098667CIL_0005I9_0009ENSMUSG00000093931ENSMUST00000179314ENSMUSG00000096770ENSMUST00000179568
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005I9_0003ENSG00000185946ENST00000423855ENST00000524631ENST00000527062ENST00000533099ENST00000533834ENSG00000240038ENST00000361355ENST00000435302ENST00000477657ENST00000610648ENSG00000243480ENST00000414303ENST00000423678ENST00000622339CIL_0005I9_0004ENSG00000243480ENST00000414303ENST00000423678ENST00000622339CIL_0005I9_0005ENSMUSG00000027981ENSMUST00000092154ENSMUST00000106535ENSMUST00000106536ENSMUST00000123232ENSMUST00000127068ENSMUST00000132220ENSMUST00000135712ENSMUSG00000070360ENSMUST00000132353CIL_0005I9_0006ENSMUSG00000074268ENSMUST00000098673ENSMUSG00000096770ENSMUST00000179568CIL_0005I9_0007ENSMUSG00000093931ENSMUST00000179314ENSMUSG00000096569ENSMUST00000098667CIL_0005I9_0008ENSMUSG00000070360ENSMUST00000132353ENSMUSG00000096569ENSMUST00000098667CIL_0005I9_0009ENSMUSG00000093931ENSMUST00000179314ENSMUSG00000096770ENSMUST00000179568
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185946 ENST00000423855 N/A 2.069±0.00 N/A N/A 2.731±0.00 2.825±0.00 N/A 2.230±0.00 0.340±0.00 0.649±0.00 0.707±0.00 1.695±0.54 0.719±0.18 4.199±0.27
ENST00000524631 N/A N/A 5.537±0.00 N/A N/A N/A N/A 2.036±0.00 N/A N/A 2.383±0.00 3.011±0.00 N/A N/A
ENST00000524641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527062 N/A N/A N/A 36.069±0.00 N/A 14.866±0.00 8.090±0.00 N/A 15.939±0.00 20.458±0.00 5.812±0.00 4.878±0.00 5.695±0.00 18.218±0.00
ENST00000531883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533099 N/A 0.914±0.00 2.534±0.00 1.616±0.00 N/A 0.907±0.00 1.045±0.00 3.029±0.00 0.228±0.00 0.658±0.00 N/A 1.650±0.00 0.231±0.03 1.476±0.78
ENST00000533834 N/A N/A 2.649±0.00 N/A N/A N/A N/A N/A N/A 2.759±0.00 N/A N/A N/A N/A
ENSG00000240038 ENST00000361355 N/A N/A N/A 7.689±0.00 4.251±0.00 N/A 3.750±0.00 N/A 8.073±0.00 2.955±2.17 N/A 1.251±0.00 N/A N/A
ENST00000435302 N/A N/A N/A N/A N/A N/A N/A N/A 0.634±0.00 N/A N/A N/A N/A N/A
ENST00000453959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477657 0.718±0.00 1.732±0.00 N/A 1.793±0.00 1.302±0.00 2.854±0.00 N/A 1.884±0.42 0.435±0.00 0.632±0.00 0.435±0.00 2.102±0.22 0.364±0.10 0.668±0.00
ENST00000481821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610648 N/A N/A 10.319±0.00 14.826±0.00 N/A N/A N/A N/A 6.910±0.00 N/A 5.345±0.00 N/A N/A N/A
ENSG00000243480 ENST00000414303 N/A N/A N/A 0.112±0.00 0.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00
ENST00000423678 N/A N/A N/A N/A 1.513±0.00 N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A 0.099±0.00
ENST00000497748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622339 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000243480 ENST00000414303 N/A N/A N/A 0.112±0.00 0.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00
ENST00000423678 N/A N/A N/A N/A 1.513±0.00 N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A 0.099±0.00
ENST00000497748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622339 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027981 ENSMUST00000092154 N/A N/A 3.413±0.38 4.754±2.45 N/A 0.907±0.24 0.658±0.00 1.146±0.00 3.614±1.36 N/A N/A 2.789±0.00 0.995±0.49 N/A
ENSMUST00000106535 N/A 4.397±1.88 2.863±0.72 9.853±5.51 N/A 1.149±0.37 1.414±0.26 1.548±0.48 2.268±0.17 3.129±0.89 N/A 3.455±1.07 1.413±0.15 2.480±0.60
ENSMUST00000106536 5.299±0.00 11.764±3.15 4.035±0.63 6.654±0.38 8.766±1.81 4.720±1.40 0.977±0.00 1.422±0.10 5.934±1.52 3.767±1.28 2.952±0.78 11.407±4.87 7.555±1.72 2.691±0.35
ENSMUST00000123232 N/A N/A N/A 35.366±0.00 N/A N/A N/A N/A N/A N/A N/A 41.103±0.00 25.219±10.99 18.947±0.00
ENSMUST00000127068 N/A 10.964±4.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.777±0.00 N/A
ENSMUST00000135712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.094±0.00
ENSMUST00000153853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070360 ENSMUST00000132353 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000074268 ENSMUST00000098673 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096770 ENSMUST00000179568 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000093931 ENSMUST00000179314 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000096569 ENSMUST00000098667 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070360 ENSMUST00000132353 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000096569 ENSMUST00000098667 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000093931 ENSMUST00000179314 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000096770 ENSMUST00000179568 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A

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