C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 558
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074500 Zfp558 10090 - 9:18455575-18478268 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034646 Zfp558-002 18472890-18473422 processed_transcript
  ENSMUST00000034647 Zfp558-003 18456192-18473559 protein_coding
  ENSMUST00000159596 Zfp558-001 18455575-18478263 nonsense_mediated_decay
  ENSMUST00000162441 Zfp558-004 18459657-18478268 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034646ENSMUST00000034647ENSMUST00000159596ENSMUST00000162441
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034646 N/A N/A N/A 0.239±0.00 0.400±0.05 N/A N/A 0.263±0.00 N/A 0.701±0.08 N/A N/A
ENSMUST00000034647 0.147±0.05 N/A 0.126±0.03 0.060±0.00 0.087±0.04 0.121±0.04 0.089±0.02 0.115±0.09 0.250±0.14 0.430±0.25 0.226±0.15 1.966±0.40
ENSMUST00000159596 0.053±0.02 0.030±0.00 0.054±0.01 0.105±0.04 0.023±0.00 0.049±0.02 0.029±0.01 0.059±0.04 N/A 0.110±0.04 N/A 1.598±0.00
ENSMUST00000162441 0.168±0.04 0.175±0.00 0.147±0.08 N/A N/A 0.190±0.00 N/A 0.342±0.00 N/A 0.511±0.03 0.122±0.00 5.936±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UU CIL_0000UU_0002 CGP 9:18455575-18485292

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167785 ZNF558 zinc finger protein 558 protein_coding Homo_sapiens

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