C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167785-ENSG00000170948 CGP 9606 19:8806170-8843340
GeneTranscriptPositionBiotype
ENSG00000167785 (ZNF558)
zinc finger protein 558 		ENST00000301475 (ZNF558-002) 8809706-8822889 protein_coding
ENST00000593891 (ZNF558-006) 8831144-8832242 retained_intron
ENST00000595786 (ZNF558-005) 8824181-8832269 processed_transcript
ENST00000596172 (ZNF558-003) 8824280-8832304 processed_transcript
ENST00000597304 (ZNF558-007) 8810938-8825099 retained_intron
ENST00000599938 (ZNF558-004) 8822708-8832314 processed_transcript
ENST00000601372 (ZNF558-001) 8806170-8832328 protein_coding
ENSG00000269400 (CTD-2529P6.4)
 ENST00000595277 (CTD-2529P6.4-001) 8833065-8833541 sense_intronic
CIL_0000UU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074500-ENSMUSG00000038691 CGP 10090 9:18455575-18485292
GeneTranscriptPositionBiotype
ENSMUSG00000038691 (Mbd3l1)
methyl-CpG binding domain protein 3-like 1 		ENSMUST00000069218 (Mbd3l1-201) 18478379-18485292 protein_coding
ENSMUSG00000074500 (Zfp558)
zinc finger protein 558 		ENSMUST00000034646 (Zfp558-002) 18472890-18473422 processed_transcript
ENSMUST00000034647 (Zfp558-003) 18456192-18473559 protein_coding
ENSMUST00000159596 (Zfp558-001) 18455575-18478263 nonsense_mediated_decay
ENSMUST00000162441 (Zfp558-004) 18459657-18478268 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UU_0001ENSG00000167785ENST00000301475ENST00000593891ENST00000595786ENST00000596172ENST00000597304ENST00000599938ENST00000601372ENSG00000269400ENST00000595277CIL_0000UU_0002ENSMUSG00000038691ENSMUST00000069218ENSMUSG00000074500ENSMUST00000034646ENSMUST00000034647ENSMUST00000159596ENSMUST00000162441
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UU_0001ENSG00000167785ENST00000301475ENST00000596172ENST00000597304ENST00000599938ENST00000601372ENSG00000269400ENST00000595277CIL_0000UU_0002ENSMUSG00000038691ENSMUST00000069218ENSMUSG00000074500ENSMUST00000034646ENSMUST00000034647ENSMUST00000159596ENSMUST00000162441
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167785 ENST00000301475 1.828±0.00 2.284±0.00 N/A 1.425±0.74 2.008±0.25 1.859±0.37 0.743±0.42 1.993±1.01 1.388±0.20 1.236±0.34 0.637±0.44 2.222±1.92 0.870±0.14 2.889±0.32
ENST00000593891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A N/A
ENST00000597304 N/A N/A 0.809±0.00 0.337±0.00 0.432±0.00 0.486±0.00 N/A N/A 0.364±0.00 0.424±0.00 N/A 0.799±0.00 0.274±0.02 N/A
ENST00000599938 N/A N/A N/A N/A N/A 2.178±0.00 0.395±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601372 N/A N/A 0.085±0.00 0.300±0.15 0.309±0.13 0.270±0.00 N/A N/A N/A 0.251±0.00 N/A 0.857±0.00 0.083±0.00 0.412±0.02
ENSG00000269400 ENST00000595277 N/A 0.049±0.00 N/A 0.026±0.00 N/A N/A 0.024±0.00 0.241±0.00 N/A N/A N/A 0.140±0.00 N/A 0.331±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038691 ENSMUST00000069218 N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 0.019±0.01 N/A N/A 0.036±0.01 0.006±0.00 62.722±12.90
ENSMUSG00000074500 ENSMUST00000034646 N/A N/A N/A N/A N/A 0.239±0.00 0.400±0.05 N/A N/A 0.263±0.00 N/A 0.701±0.08 N/A N/A
ENSMUST00000034647 0.147±0.05 N/A N/A N/A 0.126±0.03 0.060±0.00 0.087±0.04 0.121±0.04 0.089±0.02 0.115±0.09 0.250±0.14 0.430±0.25 0.226±0.15 1.966±0.40
ENSMUST00000159596 0.053±0.02 0.030±0.00 N/A N/A 0.054±0.01 0.105±0.04 0.023±0.00 0.049±0.02 0.029±0.01 0.059±0.04 N/A 0.110±0.04 N/A 1.598±0.00
ENSMUST00000162441 0.168±0.04 0.175±0.00 N/A N/A 0.147±0.08 N/A N/A 0.190±0.00 N/A 0.342±0.00 N/A 0.511±0.03 0.122±0.00 5.936±0.86

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