C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 558
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167785 ZNF558 9606 - 19:8806170-8832328 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301475 ZNF558-002 8809706-8822889 protein_coding
  ENST00000593891 ZNF558-006 8831144-8832242 retained_intron
  ENST00000595786 ZNF558-005 8824181-8832269 processed_transcript
  ENST00000596172 ZNF558-003 8824280-8832304 processed_transcript
  ENST00000597304 ZNF558-007 8810938-8825099 retained_intron
  ENST00000599938 ZNF558-004 8822708-8832314 processed_transcript
  ENST00000601372 ZNF558-001 8806170-8832328 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301475ENST00000596172ENST00000597304ENST00000599938ENST00000601372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301475 1.828±0.00 2.284±0.00 N/A 1.425±0.74 2.008±0.25 1.859±0.37 0.743±0.42 1.993±1.01 1.388±0.20 1.236±0.34 0.637±0.44 2.222±1.92 0.870±0.14 2.889±0.32
ENST00000596172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A N/A
ENST00000597304 N/A N/A 0.809±0.00 0.337±0.00 0.432±0.00 0.486±0.00 N/A N/A 0.364±0.00 0.424±0.00 N/A 0.799±0.00 0.274±0.02 N/A
ENST00000599938 N/A N/A N/A N/A N/A 2.178±0.00 0.395±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601372 N/A N/A 0.085±0.00 0.300±0.15 0.309±0.13 0.270±0.00 N/A N/A N/A 0.251±0.00 N/A 0.857±0.00 0.083±0.00 0.412±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UU CIL_0000UU_0001 CGP 19:8806170-8843340

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000074500 Zfp558 zinc finger protein 558 protein_coding Mus_musculus

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