C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: p21 protein (Cdc42/Rac)-activated kinase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074923 Pak6 10090 + 2:118663303-118698020 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099557 Pak6-001 118663303-118698020 protein_coding
  ENSMUST00000110853 Pak6-002 118677229-118698018 protein_coding
  ENSMUST00000132577 Pak6-003 118677263-118697236 retained_intron
  ENSMUST00000132843 Pak6-005 118664064-118677770 processed_transcript
  ENSMUST00000152550 Pak6-004 118663762-118664956 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099557ENSMUST00000110853ENSMUST00000132577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099557 0.039±0.00 2.045±0.16 0.982±0.00 5.334±1.80 N/A 0.056±0.00 1.087±0.09 0.515±0.00 0.220±0.09 N/A N/A 1.438±0.49 N/A 0.742±0.42
ENSMUST00000110853 0.119±0.10 12.616±1.19 4.349±0.14 5.370±1.21 1.859±0.54 0.890±0.38 2.683±0.61 4.492±0.80 0.142±0.08 4.062±1.11 0.042±0.00 4.958±2.10 2.314±1.57 0.762±0.50
ENSMUST00000132577 0.047±0.01 2.593±0.17 N/A N/A 0.450±0.06 0.218±0.00 N/A N/A N/A N/A 0.040±0.00 1.710±0.30 0.151±0.00 0.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0002 VISTA 2:118232227-118834856
CIL_0005IH CIL_0005IH_0003 CGP 2:118598211-118698020

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007612 IGI learning
GO:0007613 IGI memory
GO:0007626 IGI locomotory behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027564 protein_coding Danio_rerio
ENSDARG00000052405 pak6b p21 protein (Cdc42/Rac)-activated kinase 6b protein_coding Danio_rerio
ENSG00000137843 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 protein_coding Homo_sapiens
ENSG00000259288 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 protein_coding Homo_sapiens

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