C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: p21 protein (Cdc42/Rac)-activated kinase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110853 Pak6-002 ENSMUSG00000074923 10090 + 2:118677229-118698018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110853
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110853 0.119±0.10 12.616±1.19 4.349±0.14 5.370±1.21 1.859±0.54 0.890±0.38 2.683±0.61 4.492±0.80 0.142±0.08 4.062±1.11 0.042±0.00 4.958±2.10 2.314±1.57 0.762±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0002 VISTA 2:118232227-118834856
CIL_0005IH CIL_0005IH_0003 CGP 2:118598211-118698020

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007612 IGI learning
GO:0007613 IGI memory
GO:0007626 IGI locomotory behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260404 PAK6-001 protein_coding Homo_sapiens 0 2684
ENST00000441369 PAK6-201 protein_coding Homo_sapiens 0 2684
ENST00000453867 PAK6-202 protein_coding Homo_sapiens 0 2684
ENST00000455577 PAK6-002 protein_coding Homo_sapiens 0 2108
ENST00000542403 PAK6-004 protein_coding Homo_sapiens 0 2523
ENST00000557808 PAK6-016 retained_intron Homo_sapiens 0 527
ENST00000558055 PAK6-006 protein_coding Homo_sapiens 0 501
ENST00000558106 PAK6-011 protein_coding Homo_sapiens 0 505
ENST00000558183 PAK6-008 protein_coding Homo_sapiens 0 285
ENST00000558658 PAK6-001 nonsense_mediated_decay Homo_sapiens 0 2627
ENST00000558878 PAK6-007 protein_coding Homo_sapiens 0 222
ENST00000558965 PAK6-003 retained_intron Homo_sapiens 0 2547
ENST00000559139 PAK6-013 protein_coding Homo_sapiens 0 446
ENST00000559435 PAK6-004 nonsense_mediated_decay Homo_sapiens 1e-39 167
ENST00000559617 PAK6-010 protein_coding Homo_sapiens 0 525
ENST00000559936 PAK6-002 retained_intron Homo_sapiens 0 2627
ENST00000560346 PAK6-003 protein_coding Homo_sapiens 0 2684
ENST00000560669 PAK6-014 protein_coding Homo_sapiens 0 998
ENST00000560684 PAK6-012 protein_coding Homo_sapiens 0 268
ENST00000560806 PAK6-009 protein_coding Homo_sapiens 0.0000000000006 79
ENST00000561230 PAK6-005 protein_coding Homo_sapiens 0 422

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