C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136111-ENSG00000188243 CGP 9606 13:75284665-75549439
GeneTranscriptPositionBiotype
ENSG00000136111 (TBC1D4)
TBC1 domain family, member 4 		ENST00000377625 (TBC1D4-201) 75284665-75482114 protein_coding
ENST00000377636 (TBC1D4-001) 75284672-75482114 protein_coding
ENST00000413735 (TBC1D4-004) 75310035-75341531 protein_coding
ENST00000431480 (TBC1D4-202) 75284665-75482114 protein_coding
ENST00000478591 (TBC1D4-002) 75294865-75302821 processed_transcript
ENST00000488955 (TBC1D4-003) 75312782-75326250 processed_transcript
ENST00000493487 (TBC1D4-005) 75306466-75316552 processed_transcript
ENSG00000188243 (COMMD6)
COMM domain containing 6 		ENST00000355801 (COMMD6-005) 75526436-75537841 protein_coding
ENST00000377612 (COMMD6-006) 75526436-75538802 nonsense_mediated_decay
ENST00000377615 (COMMD6-001) 75525219-75538802 protein_coding
ENST00000377619 (COMMD6-003) 75526436-75537618 protein_coding
ENST00000406936 (COMMD6-201) 75525219-75537805 protein_coding
ENST00000460675 (COMMD6-011) 75526436-75549428 processed_transcript
ENST00000464050 (COMMD6-008) 75529709-75537844 retained_intron
ENST00000471682 (COMMD6-012) 75530114-75549439 processed_transcript
ENST00000477377 (COMMD6-010) 75529824-75537841 retained_intron
ENST00000483290 (COMMD6-009) 75526436-75530504 retained_intron
ENST00000486516 (COMMD6-007) 75526436-75537826 processed_transcript
ENST00000497707 (COMMD6-004) 75526436-75537841 processed_transcript
ENSG00000225203 (RP11-182M20.2)
 ENST00000440094 (RP11-182M20.2-001) 75375511-75377294 antisense
CIL_00004F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033083-ENSMUSG00000075486 CGP 10090 14:101442360-101640686
GeneTranscriptPositionBiotype
ENSMUSG00000033083 (Tbc1d4)
TBC1 domain family, member 4 		ENSMUST00000100340 (Tbc1d4-002) 101462974-101609191 protein_coding
ENSMUST00000159484 (Tbc1d4-005) 101462794-101608667 retained_intron
ENSMUST00000159664 (Tbc1d4-007) 101462963-101501108 nonsense_mediated_decay
ENSMUST00000159668 (Tbc1d4-006) 101462794-101608667 retained_intron
ENSMUST00000159951 (Tbc1d4-003) 101442368-101507326 protein_coding
ENSMUST00000160297 (Tbc1d4-004) 101462572-101608832 retained_intron
ENSMUST00000160473 (Tbc1d4-009) 101504707-101507270 retained_intron
ENSMUST00000161304 (Tbc1d4-008) 101442368-101463223 retained_intron
ENSMUST00000161991 (Tbc1d4-001) 101442360-101609033 protein_coding
ENSMUST00000162617 (Tbc1d4-010) 101443723-101608486 protein_coding
ENSMUSG00000075486 (Commd6)
COMM domain containing 6 		ENSMUST00000100339 (Commd6-001) 101633766-101640686 protein_coding
ENSMUST00000131022 (Commd6-002) 101640056-101640686 retained_intron
ENSMUST00000168587 (Commd6-201) 101633767-101640471 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004F_0001ENSG00000136111ENST00000377625ENST00000377636ENST00000413735ENST00000431480ENST00000478591ENST00000488955ENST00000493487ENSG00000188243ENST00000355801ENST00000377612ENST00000377615ENST00000377619ENST00000406936ENST00000460675ENST00000464050ENST00000471682ENST00000477377ENST00000483290ENST00000486516ENST00000497707ENSG00000225203ENST00000440094CIL_00004F_0002ENSMUSG00000033083ENSMUST00000100340ENSMUST00000159484ENSMUST00000159664ENSMUST00000159668ENSMUST00000159951ENSMUST00000160297ENSMUST00000160473ENSMUST00000161304ENSMUST00000161991ENSMUST00000162617ENSMUSG00000075486ENSMUST00000100339ENSMUST00000131022ENSMUST00000168587
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004F_0001ENSG00000136111ENST00000377625ENST00000377636ENST00000431480ENSG00000188243ENST00000355801ENST00000377612ENST00000377615ENST00000377619ENST00000406936ENST00000460675ENST00000483290ENSG00000225203ENST00000440094CIL_00004F_0002ENSMUSG00000033083ENSMUST00000100340ENSMUST00000159484ENSMUST00000159668ENSMUST00000159951ENSMUST00000160297ENSMUST00000161304ENSMUST00000161991ENSMUST00000162617ENSMUSG00000075486ENSMUST00000100339ENSMUST00000131022ENSMUST00000168587
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136111 ENST00000377625 6.619±0.00 0.894±0.00 5.402±0.00 N/A 4.249±2.24 1.659±0.21 2.689±1.98 4.935±3.16 1.349±0.62 0.987±0.00 6.132±0.00 4.490±1.95 2.055±0.32 2.375±0.15
ENST00000377636 N/A N/A N/A 0.683±0.00 N/A N/A 6.158±2.90 N/A N/A N/A 17.832±0.00 N/A N/A N/A
ENST00000413735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431480 N/A N/A N/A 0.945±0.00 N/A N/A 3.428±1.77 N/A N/A N/A 6.995±0.00 N/A N/A N/A
ENST00000478591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188243 ENST00000355801 22.584±0.00 29.405±0.00 N/A 8.938±1.88 22.016±16.17 12.869±7.96 18.392±9.90 N/A 17.648±3.37 30.615±15.84 11.925±3.17 63.014±32.63 27.963±7.62 21.440±0.78
ENST00000377612 N/A 16.310±0.00 N/A 4.417±0.00 14.511±0.00 55.270±0.00 N/A 33.369±0.00 5.779±0.00 56.835±0.00 N/A 49.058±0.00 N/A 28.546±0.00
ENST00000377615 N/A N/A 1.021±0.00 2.946±0.00 1.810±0.00 0.486±0.00 0.254±0.00 1.730±0.00 3.194±0.00 N/A N/A 1.556±0.00 N/A N/A
ENST00000377619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.208±0.00 N/A 11.310±0.00
ENST00000406936 N/A N/A N/A 1.380±0.00 N/A N/A N/A 2.955±0.00 N/A 0.571±0.00 N/A 2.359±0.00 N/A N/A
ENST00000460675 21.037±0.00 18.887±0.00 N/A 14.988±0.00 15.814±8.33 21.269±15.78 14.133±11.38 22.431±13.35 14.822±0.49 N/A 7.758±0.00 76.867±62.04 30.051±6.12 22.769±12.34
ENST00000464050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483290 N/A N/A 1.514±0.00 N/A 2.582±0.00 N/A N/A N/A N/A 4.743±0.00 N/A N/A N/A N/A
ENST00000486516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225203 ENST00000440094 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033083 ENSMUST00000100340 N/A N/A N/A N/A N/A N/A 2.360±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159484 N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159668 N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A 0.128±0.04 N/A N/A 2.731±0.44 N/A 0.225±0.00
ENSMUST00000159951 N/A N/A N/A 0.828±0.00 2.138±0.00 N/A N/A N/A N/A N/A N/A 1.852±0.78 0.897±0.60 N/A
ENSMUST00000160297 N/A 7.656±1.05 N/A N/A 4.299±1.89 1.756±0.37 N/A N/A 0.198±0.11 N/A N/A 2.531±0.80 N/A N/A
ENSMUST00000160473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161304 N/A N/A 1.622±0.20 0.778±0.15 6.606±2.16 1.334±0.24 3.795±0.00 1.382±0.00 0.329±0.10 N/A 2.981±0.69 4.198±2.42 1.510±1.74 0.367±0.16
ENSMUST00000161991 5.507±1.86 4.150±0.00 1.246±0.16 1.173±0.62 3.855±1.87 1.012±0.23 2.320±0.33 2.333±0.45 0.318±0.12 2.720±0.78 0.951±0.21 2.368±0.69 2.546±3.37 0.400±0.22
ENSMUST00000162617 1.655±0.61 3.616±0.72 N/A 0.466±0.00 3.364±1.22 0.854±0.36 3.270±0.23 0.992±0.65 0.168±0.04 1.763±0.49 N/A 1.567±0.48 0.383±0.00 0.234±0.11
ENSMUSG00000075486 ENSMUST00000100339 11.005±4.74 11.745±1.55 15.997±5.28 5.937±3.13 10.005±3.67 10.829±0.97 3.896±1.53 18.525±1.94 12.592±5.10 8.175±1.28 1.966±0.87 9.811±2.65 8.069±4.34 4.875±0.36
ENSMUST00000131022 3.484±0.00 8.775±3.80 N/A N/A 4.779±0.89 3.856±0.62 N/A N/A N/A 2.700±0.06 N/A 4.339±1.43 N/A 2.026±0.00
ENSMUST00000168587 N/A N/A N/A 4.234±1.10 N/A N/A 1.369±0.21 N/A 3.306±0.74 N/A 1.544±0.39 8.638±3.96 10.872±6.14 1.108±0.00

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