C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carnitine palmitoyltransferase 1b, muscle
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078937 Cpt1b 10090 - 15:89416405-89425863 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109313 Cpt1b-001 89416405-89425863 protein_coding
  ENSMUST00000165419 Cpt1b-003 89423764-89424471 retained_intron
  ENSMUST00000168376 Cpt1b-002 89424836-89425795 protein_coding
  ENSMUST00000168879 Cpt1b-004 89418765-89421401 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000109313
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000109313 11.735±4.79 21.271±8.44 3.537±0.26 29.298±24.89 199.626±17.91 21.927±3.12 7.299±7.11 8.263±2.43 113.534±8.38 3.618±0.66 82.774±28.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028I CIL_00028I_0002 CGP 15:89390174-89425863
CIL_0002HR CIL_0002HR_0002 CGP 15:89416405-89429908

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004095 TAS carnitine O-palmitoyltransferase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005741 TAS mitochondrial outer membrane
GO:0006635 IEA fatty acid beta-oxidation
GO:0008152 IEA metabolic process
GO:0015909 TAS long-chain fatty acid transport
GO:0016021 IEA integral component of membrane
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058285 cpt1b carnitine palmitoyltransferase 1B (muscle) protein_coding Danio_rerio
ENSG00000205560 CPT1B carnitine palmitoyltransferase 1B (muscle) protein_coding Homo_sapiens

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