C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 3, calsenilin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103215 Kcnip3-003 ENSMUSG00000079056 10090 - 2:127456498-127521370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000103215
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103215 1.141±0.03 0.425±0.00 1.053±0.06 7.864±4.54 0.467±0.11 0.211±0.06 0.105±0.05 0.185±0.00 0.032±0.01 2.443±1.24 0.212±0.17 0.341±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006813 TAS potassium ion transport
GO:0006915 IEA apoptotic process
GO:0008022 IPI protein C-terminus binding
GO:0019233 IMP sensory perception of pain
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043523 IDA regulation of neuron apoptotic process
GO:0045892 TAS negative regulation of transcription, DNA-templated
GO:0048265 IMP response to pain
GO:0048266 IMP behavioral response to pain
GO:0048306 IPI calcium-dependent protein binding
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000064581 kcnip3b-201 protein_coding Danio_rerio 0 440
ENSDART00000124751 kcnip3b-001 protein_coding Danio_rerio 0 440
ENST00000295225 KCNIP3-001 protein_coding Homo_sapiens 0 1000
ENST00000360990 KCNIP3-201 protein_coding Homo_sapiens 0 946
ENST00000377181 KCNIP3-003 processed_transcript Homo_sapiens 0 824
ENST00000468529 KCNIP3-004 protein_coding Homo_sapiens 0 789
ENST00000475491 KCNIP3-002 retained_intron Homo_sapiens 2e-35 156
ENST00000486055 KCNIP3-005 processed_transcript Homo_sapiens 0.000000000002 77

Loading