C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 3, calsenilin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028850 Kcnip3-001 ENSMUSG00000079056 10090 - 2:127456498-127521370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000028850
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028850 0.139±0.05 0.254±0.00 1.990±1.31 0.300±0.00 0.329±0.13 0.308±0.00 0.094±0.06 0.294±0.00 0.063±0.04 2.292±1.41 0.179±0.10 0.238±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006813 TAS potassium ion transport
GO:0006886 IEA intracellular protein transport
GO:0008022 IPI protein C-terminus binding
GO:0015459 IEA potassium channel regulator activity
GO:0019233 IMP sensory perception of pain
GO:0030424 IEA axon
GO:0030425 IEA dendrite
GO:0032993 IEA protein-DNA complex
GO:0043523 IDA regulation of neuron apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0043679 IEA axon terminus
GO:0044325 IEA ion channel binding
GO:0045892 TAS negative regulation of transcription, DNA-templated
GO:0048265 IMP response to pain
GO:0048266 IMP behavioral response to pain
GO:0048306 IPI calcium-dependent protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000064581 kcnip3b-201 protein_coding Danio_rerio 0 420
ENSDART00000124751 kcnip3b-001 protein_coding Danio_rerio 0 420
ENST00000295225 KCNIP3-001 protein_coding Homo_sapiens 0 979
ENST00000360990 KCNIP3-201 protein_coding Homo_sapiens 0 926
ENST00000377181 KCNIP3-003 processed_transcript Homo_sapiens 0 824
ENST00000468529 KCNIP3-004 protein_coding Homo_sapiens 0 787
ENST00000475491 KCNIP3-002 retained_intron Homo_sapiens 2e-35 156
ENST00000486055 KCNIP3-005 processed_transcript Homo_sapiens 0.000000000002 77

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