C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, class II, locus Mb1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079547 H2-DMb1 10090 + 17:34153072-34160230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114232 H2-DMb1-001 34153072-34160230 protein_coding
  ENSMUST00000174765 H2-DMb1-002 34156845-34160101 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114232ENSMUST00000174765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114232 12.662±3.19 4.414±1.09 9.162±0.19 0.154±0.05 22.842±6.16 8.396±1.20 2.308±0.84 14.782±1.43 1.377±0.83 31.872±9.49 0.976±0.73 7.087±2.03 0.482±0.70 0.592±0.31
ENSMUST00000174765 4.837±0.00 5.138±1.60 N/A 0.100±0.00 19.695±6.56 4.626±1.41 N/A 3.842±0.48 1.071±0.62 N/A 0.326±0.16 2.023±0.23 0.056±0.02 1.179±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PK CIL_0001PK_0005 CGP 17:34143307-34160230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0019882 IDA antigen processing and presentation
GO:0019886 IDA antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0042613 IEA MHC class II protein complex
GO:0051085 IDA chaperone mediated protein folding requiring cofactor

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041705 si:busm1-228j01.6 si:busm1-228j01.6 protein_coding Danio_rerio
ENSDARG00000053738 si:dkey-33b17.3 si:dkey-33b17.3 protein_coding Danio_rerio
ENSDARG00000054921 wu:fd58b11 wu:fd58b11 protein_coding Danio_rerio
ENSDARG00000055447 si:busm1-194e12.12 si:busm1-194e12.12 protein_coding Danio_rerio
ENSDARG00000056330 mhc2dbb major histocompatibility complex class II DBB gene protein_coding Danio_rerio
ENSDARG00000074510 si:busm1-104n07.3 si:busm1-104n07.3 protein_coding Danio_rerio
ENSDARG00000076307 si:zfos-2070c2.3 si:zfos-2070c2.3 protein_coding Danio_rerio
ENSDARG00000079105 mhc2dab major histocompatibility complex class II DAB gene protein_coding Danio_rerio
ENSDARG00000088872 si:busm1-228j01.4 si:busm1-228j01.4 protein_coding Danio_rerio
ENSDARG00000093706 si:dkey-33b17.3 si:dkey-33b17.3 protein_coding Danio_rerio
ENSG00000242574 HLA-DMB major histocompatibility complex, class II, DM beta protein_coding Homo_sapiens
ENSG00000248993 XXbac-BPG181M17.5 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000412457} protein_coding Homo_sapiens

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