Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
ENSDARG00000053738-ENSDARG00000093706	CGP	7955	8:35956336-36146143
Gene	Transcript	Position	Biotype
ENSDARG00000053739 (si:busm1-160c18.1) si:busm1-160c18.1	ENSDART00000075834 (si:busm1-160c18.1-001)	36131721-36140111	protein_coding
ENSDARG00000074887 (CT583723.1) Uncharacterized protein	ENSDART00000108773 (CT583723.1-201)	36069450-36125062	protein_coding

CIL_0001PK_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000198502-ENSG00000196126	CGP	9606	6:32517343-32589848
Gene	Transcript	Position	Biotype
ENSG00000196126 (HLA-DRB1) major histocompatibility complex, class II, DR beta 1	ENST00000360004 (HLA-DRB1-001)	32578769-32589848	protein_coding
	ENST00000611060 (HLA-DRB1-201)	32552990-32589805	protein_coding
ENSG00000198502 (HLA-DRB5) major histocompatibility complex, class II, DR beta 5	ENST00000374975 (HLA-DRB5-001)	32517343-32530287	protein_coding
ENSG00000229391 (HLA-DRB6) major histocompatibility complex, class II, DR beta 6 (pseudogene)	ENST00000411500 (HLA-DRB6-002)	32552713-32560002	processed_transcript
	ENST00000437183 (HLA-DRB6-003)	32552949-32560022	processed_transcript
	ENST00000437650 (HLA-DRB6-001)	32553046-32558186	transcribed_unprocessed_pseudogene

CIL_0001PK_0003 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000232629-ENSG00000241106	CGP	9606	6:32756098-32817048
Gene	Transcript	Position	Biotype
ENSG00000241106 (HLA-DOB) major histocompatibility complex, class II, DO beta	ENST00000438763 (HLA-DOB-001)	32812763-32817048	protein_coding
	ENST00000447394 (HLA-DOB-004)	32814370-32816910	protein_coding
	ENST00000475235 (HLA-DOB-002)	32813047-32816988	retained_intron
	ENST00000488325 (HLA-DOB-003)	32812763-32816976	nonsense_mediated_decay
ENSG00000250264 (TAP2) Uncharacterized protein {ECO:0000313\|Ensembl:ENSP00000391806}	ENST00000452392 (TAP2-001)	32813767-32838822	protein_coding

CIL_0001PK_0004 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000242574-ENSG00000248993	CGP	9606	6:32934629-32953122
Gene	Transcript	Position	Biotype
ENSG00000204257 (HLA-DMA) major histocompatibility complex, class II, DM alpha	ENST00000374843 (HLA-DMA-001)	32948613-32953122	protein_coding
	ENST00000395303 (HLA-DMA-002)	32948613-32953108	protein_coding
	ENST00000395305 (HLA-DMA-004)	32948613-32953061	protein_coding
	ENST00000422832 (HLA-DMA-009)	32949657-32969094	protein_coding
	ENST00000456800 (HLA-DMA-006)	32949271-32952461	protein_coding
	ENST00000464392 (HLA-DMA-010)	32948771-32968444	processed_transcript
	ENST00000475627 (HLA-DMA-005)	32950084-32953034	retained_intron
	ENST00000477541 (HLA-DMA-003)	32948613-32953108	retained_intron
	ENST00000480785 (HLA-DMA-007)	32948613-32949671	retained_intron

CIL_0001PK_0005 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000037548-ENSMUSG00000079547	CGP	10090	17:34143307-34160230
Gene	Transcript	Position	Biotype
ENSMUSG00000037548 (H2-DMb2) histocompatibility 2, class II, locus Mb2	ENSMUST00000041982 (H2-DMb2-001)	34145313-34151553	protein_coding
	ENSMUST00000171231 (H2-DMb2-002)	34145271-34151549	protein_coding
	ENSMUST00000173262 (H2-DMb2-003)	34143307-34147839	processed_transcript
ENSMUSG00000079547 (H2-DMb1) histocompatibility 2, class II, locus Mb1	ENSMUST00000114232 (H2-DMb1-001)	34153072-34160230	protein_coding
	ENSMUST00000174765 (H2-DMb1-002)	34156845-34160101	processed_transcript

CIL_0001PK_0006 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000041538-ENSMUSG00000073421	CGP	10090	17:34238903-34269418
Gene	Transcript	Position	Biotype
ENSMUSG00000041538 (H2-Ob) histocompatibility 2, O region beta locus	ENSMUST00000095342 (H2-Ob-001)	34238903-34245907	protein_coding
	ENSMUST00000167280 (H2-Ob-003)	34238931-34245798	protein_coding
	ENSMUST00000173681 (H2-Ob-004)	34238905-34241504	retained_intron
	ENSMUST00000173764 (H2-Ob-002)	34240036-34244460	protein_coding
ENSMUSG00000073421 (H2-Ab1) histocompatibility 2, class II antigen A, beta 1	ENSMUST00000040828 (H2-Ab1-001)	34263209-34269418	protein_coding
	ENSMUST00000173103 (H2-Ab1-003)	34267102-34268034	retained_intron
	ENSMUST00000174875 (H2-Ab1-002)	34268270-34269394	retained_intron
ENSMUSG00000092222 (Gm20506) predicted gene 20506	ENSMUST00000172952 (Gm20506-001)	34249057-34250264	lincRNA

CIL_0001PK_0007 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000060586-ENSMUSG00000067341	CGP	10090	17:34305877-34340229
Gene	Transcript	Position	Biotype
ENSMUSG00000060586 (H2-Eb1) histocompatibility 2, class II antigen E beta	ENSMUST00000074557 (H2-Eb1-001)	34305877-34316199	protein_coding
ENSMUSG00000067341 (H2-Eb2) histocompatibility 2, class II antigen E beta2	ENSMUST00000050325 (H2-Eb2-001)	34325665-34340229	protein_coding

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSDARG00000053739

ENSDART00000075834

N/A

0.311±0.00

0.508±0.08

N/A

0.095±0.00

N/A

ENSDARG00000074887

ENSDART00000108773

N/A

0.413±0.22

N/A

0.148±0.00

N/A

0.073±0.00

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000196126

ENST00000360004

112.178±0.00

381.024±0.00

9.822±0.00

30.786±27.67

67.274±36.13

25.917±22.68

60.613±0.00

104.884±92.63

9.171±0.70

333.588±304.38

31.381±0.00

44.670±54.69

75.028±31.34

30.367±26.08

ENST00000611060

N/A

30.207±9.47

7.903±4.31

3.741±0.00

6.595±0.00

5.863±3.53

26.863±0.00

4.685±0.00

8.246±5.26

9.331±0.00

2.588±0.00

ENSG00000198502

ENST00000374975

20.748±0.00

95.013±0.00

4.939±0.00

8.567±0.00

22.585±0.21

9.241±0.00

27.181±26.70

56.145±54.00

3.992±1.02

130.601±130.29

5.688±1.13

17.197±18.70

40.577±22.40

4.342±3.07

ENSG00000229391

ENST00000411500

N/A

25.415±0.00

9.002±0.00

N/A

14.428±0.00

ENST00000437183

N/A

ENST00000437650

25.382±0.00

N/A

3.613±0.00

N/A

1.302±0.00

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000241106

ENST00000438763

N/A

22.128±0.00

N/A

ENST00000447394

N/A

ENST00000475235

N/A

ENST00000488325

N/A

ENSG00000250264

ENST00000452392

5.173±0.00

N/A

0.715±0.00

N/A

3.802±0.00

3.030±0.84

1.202±0.59

7.443±0.00

2.294±0.00

N/A

1.416±0.69

5.372±1.61

5.901±2.86

3.083±2.56

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000204257

ENST00000374843

40.926±0.00

208.484±0.00

N/A

64.788±0.00

N/A

21.053±0.00

48.891±0.00

N/A

190.302±0.00

N/A

35.954±2.56

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000037548

ENSMUST00000041982

1.767±0.53

0.715±0.34

2.152±0.25

0.231±0.02

35.473±16.36

5.210±0.88

0.800±0.62

2.403±1.44

0.455±0.21

9.347±2.61

0.916±1.64

1.205±0.69

0.288±0.26

0.120±0.05

ENSMUST00000171231

0.379±0.09

0.452±0.14

0.364±0.00

N/A

6.751±2.01

2.498±0.56

0.612±0.33

1.086±0.57

0.305±0.18

3.977±0.00

0.148±0.07

0.837±0.41

N/A

ENSMUST00000173262

N/A

0.320±0.00

N/A

0.302±0.00

N/A

0.334±0.00

N/A

0.140±0.00

ENSMUSG00000079547

ENSMUST00000114232

12.662±3.19

4.414±1.09

9.162±0.19

0.154±0.05

22.842±6.16

8.396±1.20

2.308±0.84

14.782±1.43

1.377±0.83

31.872±9.49

0.976±0.73

7.087±2.03

0.482±0.70

0.592±0.31

ENSMUST00000174765

4.837±0.00

5.138±1.60

N/A

0.100±0.00

19.695±6.56

4.626±1.41

N/A

3.842±0.48

1.071±0.62

N/A

0.326±0.16

2.023±0.23

0.056±0.02

1.179±0.56

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000041538

ENSMUST00000095342

0.815±0.44

0.331±0.14

0.354±0.09

0.102±0.09

17.059±11.02

0.636±0.14

0.791±0.69

0.773±0.44

0.310±0.20

5.200±0.89

1.016±1.35

0.766±0.30

0.046±0.03

0.023±0.01

ENSMUST00000167280

N/A

0.018±0.01

N/A

0.048±0.00

N/A

0.039±0.01

N/A

0.018±0.01

0.024±0.00

ENSMUST00000173681

N/A

0.251±0.00

N/A

1.186±0.00

N/A

0.164±0.00

N/A

0.088±0.02

1.642±0.00

N/A

0.198±0.00

ENSMUST00000173764

0.236±0.00

0.326±0.00

N/A

10.330±0.00

1.615±0.40

N/A

0.908±0.68

0.367±0.24

N/A

0.071±0.05

0.893±0.38

0.049±0.02

0.052±0.00

ENSMUSG00000073421

ENSMUST00000040828

373.476±71.29

183.337±36.10

112.444±10.45

0.486±0.14

993.054±243.86

272.781±30.79

57.580±22.40

164.666±22.41

24.777±22.17

504.754±132.77

14.563±14.74

287.639±119.84

5.713±9.57

11.183±5.40

ENSMUST00000173103

N/A

1.230±0.00

ENSMUST00000174875

N/A

1005.050±0.00

N/A

23.821±7.92

0.250±0.04

N/A

ENSMUSG00000092222

ENSMUST00000172952

0.203±0.00

N/A

0.018±0.00

N/A

3.030±0.00

0.304±0.01

0.142±0.02

0.231±0.14

0.061±0.06

0.319±0.13

N/A

0.532±0.19

0.012±0.00

0.102±0.00

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000060586

ENSMUST00000074557

142.042±15.13

46.756±3.23

104.758±4.85

0.481±0.21

346.083±25.67

83.141±3.07

30.137±12.17

77.564±12.94

11.018±10.64

163.930±22.45

11.507±11.28

78.211±14.65

4.181±6.66

3.169±1.41

ENSMUSG00000067341

ENSMUST00000050325

0.103±0.03

0.104±0.05

0.059±0.01

0.027±0.02

3.918±2.49

0.607±0.20

0.103±0.07

0.244±0.23

0.055±0.05

0.698±0.09

0.340±0.00

0.103±0.06

0.013±0.00

0.017±0.00

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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