C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, class II, locus Mb1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174765 H2-DMb1-002 ENSMUSG00000079547 10090 + 17:34156845-34160101 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000174765
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000174765 4.837±0.00 5.138±1.60 0.100±0.00 19.695±6.56 4.626±1.41 3.842±0.48 1.071±0.62 0.326±0.16 2.023±0.23 0.056±0.02 1.179±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PK CIL_0001PK_0005 CGP 17:34143307-34160230

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383231 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000395312 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000412948 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000413038 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000413617 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000413696 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000414017 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000418107 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000418759 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000421456 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000424822 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000424874 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000428420 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000428864 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000430115 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000433242 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000435204 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000437382 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000437583 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000438310 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000438510 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000439344 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000440078 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000440269 HLA-DMB-007 protein_coding Homo_sapiens 0 235
ENST00000441177 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000447454 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000448798 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000450897 HLA-DMB-001 protein_coding Homo_sapiens 0 351
ENST00000451921 HLA-DMB-006 protein_coding Homo_sapiens 0 348
ENST00000452407 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000456428 HLA-DMB-002 protein_coding Homo_sapiens 0 348
ENST00000461570 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000463532 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000466737 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000476119 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000480557 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000482267 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000487546 HLA-DMB-003 retained_intron Homo_sapiens 0 246
ENST00000498020 HLA-DMB-003 retained_intron Homo_sapiens 0 246

Loading