C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synovial sarcoma, X member B, breakpoint 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079701 Ssxb3 10090 - X:8583404-8591816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089374 Ssxb3-001 8583404-8591816 protein_coding
  ENSMUST00000089379 Ssxb3-201 8583544-8589246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000089374ENSMUST00000089379
Transcript ID Testis
ENSMUST00000089374 0.355±0.10
ENSMUST00000089379 0.573±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y9 CIL_0000Y9_000F CGP X:8542705-8591816
CIL_0000Y9 CIL_0000Y9_000E CGP X:8583404-8690844

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126752 SSX1 synovial sarcoma, X breakpoint 1 protein_coding Homo_sapiens
ENSG00000165583 SSX5 synovial sarcoma, X breakpoint 5 protein_coding Homo_sapiens
ENSG00000165584 SSX3 synovial sarcoma, X breakpoint 3 protein_coding Homo_sapiens
ENSG00000187754 SSX7 synovial sarcoma, X breakpoint 7 protein_coding Homo_sapiens
ENSG00000241476 SSX2 synovial sarcoma, X breakpoint 2 protein_coding Homo_sapiens
ENSG00000268009 SSX4 synovial sarcoma, X breakpoint 4 protein_coding Homo_sapiens
ENSG00000268447 SSX2B synovial sarcoma, X breakpoint 2B protein_coding Homo_sapiens
ENSG00000269791 SSX4B synovial sarcoma, X breakpoint 4B protein_coding Homo_sapiens

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