C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: epithelial splicing regulatory protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115979 Esrp2-001 ENSMUSG00000084128 10090 - 8:106130319-106136974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000115979
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000115979 3.148±0.49 1.638±0.00 21.066±0.43 7.069±0.36 16.469±2.65 6.914±2.23 11.347±4.87 14.131±0.72 6.795±0.65 13.360±6.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006A CIL_00006A_0002 CGP 8:106009621-106130537
CIL_00055Z CIL_00055Z_0002 CGP 8:106059603-106136974
CIL_00024G CIL_00024G_0002 CGP 8:106130319-106164713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 ISS mRNA binding
GO:0005634 ISS nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251366 ESRP2-002 retained_intron Homo_sapiens 0 1491
ENST00000473183 ESRP2-001 protein_coding Homo_sapiens 0 2811
ENST00000562567 ESRP2-010 retained_intron Homo_sapiens 0 420
ENST00000562724 ESRP2-007 protein_coding Homo_sapiens 0 403
ENST00000562738 ESRP2-011 retained_intron Homo_sapiens 0 616
ENST00000563159 ESRP2-012 retained_intron Homo_sapiens 0 329
ENST00000564382 ESRP2-006 protein_coding Homo_sapiens 0 577
ENST00000564465 ESRP2-008 retained_intron Homo_sapiens 0 401
ENST00000565213 ESRP2-014 retained_intron Homo_sapiens 0 226
ENST00000565858 ESRP2-004 protein_coding Homo_sapiens 0 1851
ENST00000566774 ESRP2-005 nonsense_mediated_decay Homo_sapiens 0 763
ENST00000569964 ESRP2-009 retained_intron Homo_sapiens 0 529

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