C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4930526A20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085521 4930526A20Rik 10090 - 17:28075050-28076677 pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000134228 4930526A20Rik-001 28075415-28076355 transcribed_processed_pseudogene
  ENSMUST00000142461 4930526A20Rik-002 28075050-28076677 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000134228ENSMUST00000142461
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000134228 0.311±0.13 0.367±0.21 0.027±0.01 0.017±0.00 0.278±0.00 0.315±0.13 0.121±0.01 0.128±0.09 0.072±0.05 0.441±0.33 0.723±0.39 N/A 1.825±0.19
ENSMUST00000142461 0.176±0.10 0.141±0.06 0.471±0.44 0.534±0.39 0.208±0.07 0.379±0.16 0.033±0.01 0.156±0.06 0.091±0.08 0.544±0.14 0.439±0.27 0.202±0.12 6.111±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EU CIL_0002EU_0002 CGP 17:27909340-28080639
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002ET CIL_0002ET_0002 CGP 17:28066747-28174852

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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