C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930526A20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134228 4930526A20Rik-001 ENSMUSG00000085521 10090 - 17:28075415-28076355 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000134228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000134228 0.311±0.13 0.367±0.21 0.027±0.01 0.017±0.00 0.278±0.00 0.315±0.13 0.121±0.01 0.128±0.09 0.072±0.05 0.441±0.33 0.723±0.39 1.825±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EU CIL_0002EU_0002 CGP 17:27909340-28080639
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002ET CIL_0002ET_0002 CGP 17:28066747-28174852

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302937 TSEN34-001 protein_coding Homo_sapiens 0 824
ENST00000396383 TSEN34-003 protein_coding Homo_sapiens 0 824
ENST00000396388 TSEN34-004 protein_coding Homo_sapiens 0 824
ENST00000429671 TSEN34-201 protein_coding Homo_sapiens 0 780
ENST00000455798 TSEN34-006 protein_coding Homo_sapiens 0 632
ENST00000456872 TSEN34-005 protein_coding Homo_sapiens 0 660
ENST00000496583 TSEN34-002 retained_intron Homo_sapiens 0 255
ENST00000611560 TSEN34-212 protein_coding Homo_sapiens 0 819
ENST00000611798 TSEN34-001 protein_coding Homo_sapiens 0 819
ENST00000612236 TSEN34-001 protein_coding Homo_sapiens 0 824
ENST00000612393 TSEN34-003 protein_coding Homo_sapiens 0 824
ENST00000613310 TSEN34-205 protein_coding Homo_sapiens 0 819
ENST00000613337 TSEN34-206 protein_coding Homo_sapiens 0 774
ENST00000613589 TSEN34-006 retained_intron Homo_sapiens 0 255
ENST00000613653 TSEN34-213 protein_coding Homo_sapiens 0 774
ENST00000613712 TSEN34-202 protein_coding Homo_sapiens 0 819
ENST00000613888 TSEN34-219 protein_coding Homo_sapiens 0 819
ENST00000614265 TSEN34-006 retained_intron Homo_sapiens 0 255
ENST00000614483 TSEN34-005 protein_coding Homo_sapiens 0 774
ENST00000614734 TSEN34-209 protein_coding Homo_sapiens 0 774
ENST00000614948 TSEN34-002 protein_coding Homo_sapiens 0 824
ENST00000614984 TSEN34-220 protein_coding Homo_sapiens 0 819
ENST00000615000 TSEN34-003 protein_coding Homo_sapiens 0 819
ENST00000615079 TSEN34-004 protein_coding Homo_sapiens 0 819
ENST00000615482 TSEN34-007 protein_coding Homo_sapiens 0 632
ENST00000615811 TSEN34-221 protein_coding Homo_sapiens 0 774
ENST00000615900 TSEN34-207 protein_coding Homo_sapiens 0 819
ENST00000615975 TSEN34-001 protein_coding Homo_sapiens 0 824
ENST00000616063 TSEN34-002 protein_coding Homo_sapiens 0 824
ENST00000616209 TSEN34-210 protein_coding Homo_sapiens 0 819
ENST00000617149 TSEN34-203 protein_coding Homo_sapiens 0 819
ENST00000617543 TSEN34-218 protein_coding Homo_sapiens 0 780
ENST00000617559 TSEN34-005 protein_coding Homo_sapiens 0 660
ENST00000617739 TSEN34-005 protein_coding Homo_sapiens 0 667
ENST00000617902 TSEN34-215 protein_coding Homo_sapiens 0 819
ENST00000618135 TSEN34-003 protein_coding Homo_sapiens 0 824
ENST00000618447 TSEN34-208 protein_coding Homo_sapiens 0 780
ENST00000619263 TSEN34-204 protein_coding Homo_sapiens 0 774
ENST00000619273 TSEN34-216 protein_coding Homo_sapiens 0 774
ENST00000619994 TSEN34-217 protein_coding Homo_sapiens 0 819
ENST00000621740 TSEN34-004 protein_coding Homo_sapiens 0 632
ENST00000622076 TSEN34-004 protein_coding Homo_sapiens 0 632
ENST00000622524 TSEN34-211 protein_coding Homo_sapiens 0 819
ENST00000622538 TSEN34-214 protein_coding Homo_sapiens 0 819
ENST00000622661 TSEN34-002 retained_intron Homo_sapiens 0 255

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