C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 4930526A20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142461 4930526A20Rik-002 ENSMUSG00000085521 10090 - 17:28075050-28076677 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000142461
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000142461 0.176±0.10 0.141±0.06 0.471±0.44 0.534±0.39 0.208±0.07 0.379±0.16 0.033±0.01 0.156±0.06 0.091±0.08 0.544±0.14 0.439±0.27 0.202±0.12 6.111±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EU CIL_0002EU_0002 CGP 17:27909340-28080639
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002ET CIL_0002ET_0002 CGP 17:28066747-28174852

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302937 TSEN34-001 protein_coding Homo_sapiens 0 845
ENST00000396383 TSEN34-003 protein_coding Homo_sapiens 0 845
ENST00000396388 TSEN34-004 protein_coding Homo_sapiens 0 854
ENST00000429671 TSEN34-201 protein_coding Homo_sapiens 0 785
ENST00000455798 TSEN34-006 protein_coding Homo_sapiens 0 638
ENST00000456872 TSEN34-005 protein_coding Homo_sapiens 0 665
ENST00000496583 TSEN34-002 retained_intron Homo_sapiens 0 268
ENST00000611560 TSEN34-212 protein_coding Homo_sapiens 0 839
ENST00000611798 TSEN34-001 protein_coding Homo_sapiens 0 839
ENST00000612236 TSEN34-001 protein_coding Homo_sapiens 0 845
ENST00000612393 TSEN34-003 protein_coding Homo_sapiens 0 854
ENST00000613310 TSEN34-205 protein_coding Homo_sapiens 0 839
ENST00000613337 TSEN34-206 protein_coding Homo_sapiens 0 780
ENST00000613589 TSEN34-006 retained_intron Homo_sapiens 0 268
ENST00000613653 TSEN34-213 protein_coding Homo_sapiens 0 780
ENST00000613712 TSEN34-202 protein_coding Homo_sapiens 0 839
ENST00000613888 TSEN34-219 protein_coding Homo_sapiens 0 839
ENST00000614265 TSEN34-006 retained_intron Homo_sapiens 0 268
ENST00000614483 TSEN34-005 protein_coding Homo_sapiens 0 780
ENST00000614734 TSEN34-209 protein_coding Homo_sapiens 0 780
ENST00000614948 TSEN34-002 protein_coding Homo_sapiens 0 845
ENST00000614984 TSEN34-220 protein_coding Homo_sapiens 0 839
ENST00000615000 TSEN34-003 protein_coding Homo_sapiens 0 839
ENST00000615079 TSEN34-004 protein_coding Homo_sapiens 0 848
ENST00000615482 TSEN34-007 protein_coding Homo_sapiens 0 638
ENST00000615811 TSEN34-221 protein_coding Homo_sapiens 0 780
ENST00000615900 TSEN34-207 protein_coding Homo_sapiens 0 839
ENST00000615975 TSEN34-001 protein_coding Homo_sapiens 0 845
ENST00000616063 TSEN34-002 protein_coding Homo_sapiens 0 845
ENST00000616209 TSEN34-210 protein_coding Homo_sapiens 0 839
ENST00000617149 TSEN34-203 protein_coding Homo_sapiens 0 839
ENST00000617543 TSEN34-218 protein_coding Homo_sapiens 0 785
ENST00000617559 TSEN34-005 protein_coding Homo_sapiens 0 665
ENST00000617739 TSEN34-005 protein_coding Homo_sapiens 0 673
ENST00000617902 TSEN34-215 protein_coding Homo_sapiens 0 839
ENST00000618135 TSEN34-003 protein_coding Homo_sapiens 0 854
ENST00000618447 TSEN34-208 protein_coding Homo_sapiens 0 785
ENST00000619263 TSEN34-204 protein_coding Homo_sapiens 0 780
ENST00000619273 TSEN34-216 protein_coding Homo_sapiens 0 780
ENST00000619994 TSEN34-217 protein_coding Homo_sapiens 0 839
ENST00000621740 TSEN34-004 protein_coding Homo_sapiens 0 638
ENST00000622076 TSEN34-004 protein_coding Homo_sapiens 0 638
ENST00000622524 TSEN34-211 protein_coding Homo_sapiens 0 839
ENST00000622538 TSEN34-214 protein_coding Homo_sapiens 0 839
ENST00000622661 TSEN34-002 retained_intron Homo_sapiens 0 268

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