C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: non-protein coding RNA, repressor of NFAT
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000086484 Nron 10090 + 2:33805816-33813591 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000140412 Nron-003 33805859-33811438 antisense
  ENSMUST00000151761 Nron-002 33805828-33812455 antisense
  ENSMUST00000156297 Nron-001 33805816-33813591 antisense

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000140412ENSMUST00000151761ENSMUST00000156297
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000140412 N/A 0.135±0.00 N/A 0.125±0.00 0.178±0.08 0.183±0.03 0.050±0.00 N/A 0.041±0.02 0.160±0.04 0.174±0.03 0.045±0.00 0.032±0.00
ENSMUST00000151761 0.045±0.03 0.105±0.05 N/A 0.087±0.05 N/A 0.026±0.00 0.034±0.00 0.027±0.01 0.033±0.02 0.041±0.01 0.066±0.04 N/A 0.013±0.00
ENSMUST00000156297 0.039±0.00 N/A 0.011±0.00 0.058±0.00 0.024±0.01 0.038±0.00 N/A 0.022±0.01 0.015±0.01 0.047±0.01 0.009±0.00 N/A 0.016±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008M0 CIL_0008M0_0002 VISTA 2:33488143-34090459
CIL_0002XW CIL_0002XW_0002 CGP 2:33560965-33887946
CIL_0007X9 CIL_0007X9_0002 VISTA 2:33575330-34178839
CIL_00095V CIL_00095V_0002 VISTA 2:33716020-34317341
CIL_0007YU CIL_0007YU_0002 VISTA 2:33733022-34333763
CIL_0007LN CIL_0007LN_0002 UCNEbase 2:33746984-34647960
CIL_0008R2 CIL_0008R2_0002 VISTA 2:33764832-34366528

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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