C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB42, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089687 Rab42 10090 - 4:132302197-132303385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040411 Rab42-001 132302197-132303385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040411 1.346±0.46 1.500±0.42 1.041±0.00 0.249±0.07 1.463±0.86 1.648±0.39 1.536±0.26 3.327±0.76 0.211±0.15 0.939±0.21 0.365±0.09 1.747±0.81 0.565±0.12 11.758±3.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227
CIL_0001X2 CIL_0001X2_0002 CGP 4:132274375-132303385

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034215 rab42a RAB42, member RAS oncogene family a protein_coding Danio_rerio
ENSG00000188060 RAB42 RAB42, member RAS oncogene family protein_coding Homo_sapiens

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