C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptojanin 2 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090935 Synj2bp 10090 - 12:81497941-81532911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019829 Synj2bp-005 81501796-81504962 retained_intron
  ENSMUST00000114201 Synj2bp-002 81504121-81511430 protein_coding
  ENSMUST00000163402 Synj2bp-001 81497941-81532911 protein_coding
  ENSMUST00000164431 Synj2bp-004 81499142-81532899 protein_coding
  ENSMUST00000169158 Synj2bp-003 81504251-81532880 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019829ENSMUST00000163402ENSMUST00000164431
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019829 12.928±0.48 N/A N/A N/A 12.734±2.51 11.677±0.00 10.384±2.11 13.229±0.00 16.349±1.60 12.065±1.92 N/A 14.903±2.80 N/A 36.545±9.69
ENSMUST00000163402 3.742±0.91 3.984±0.65 4.738±0.56 3.633±0.67 2.736±0.57 4.102±0.95 3.026±0.55 3.699±0.86 3.816±1.34 4.052±0.46 2.372±0.26 4.368±2.06 2.010±0.79 6.133±1.01
ENSMUST00000164431 5.509±0.88 8.360±1.87 13.893±2.00 2.725±0.00 4.948±1.05 4.909±1.47 4.219±0.29 8.059±1.00 7.266±1.87 5.997±1.00 9.185±0.72 6.264±1.44 5.451±1.75 4.615±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M5 CIL_0002M5_0002 CGP 12:81497941-81568474

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002092 IDA positive regulation of receptor internalization
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0006897 IEA endocytosis
GO:0008022 IEA protein C-terminus binding
GO:0009986 IDA cell surface
GO:0031307 IEA integral component of mitochondrial outer membrane
GO:0032926 IDA negative regulation of activin receptor signaling pathway
GO:0032927 IDA positive regulation of activin receptor signaling pathway
GO:0048312 IEA intracellular distribution of mitochondria
GO:0070699 IPI type II activin receptor binding
GO:2000010 IDA positive regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077552 CABZ01081650.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000213463 SYNJ2BP synaptojanin 2 binding protein protein_coding Homo_sapiens

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