C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002M5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213463-ENSG00000139985 CGP 9606 14:70366496-70459899
GeneTranscriptPositionBiotype
ENSG00000139985 (ADAM21)
ADAM metallopeptidase domain 21 		ENST00000603540 (ADAM21-001) 70452157-70459899 protein_coding
ENSG00000213463 (SYNJ2BP)
synaptojanin 2 binding protein 		ENST00000256366 (SYNJ2BP-001) 70366496-70417045 protein_coding
ENST00000554216 (SYNJ2BP-002) 70372488-70417061 processed_transcript
ENSG00000257759 (RP11-486O13.4)
 ENST00000556646 (RP11-486O13.4-001) 70425812-70547464 lincRNA
ENSG00000258644 (SYNJ2BP-COX16)
SYNJ2BP-COX16 readthrough 		ENST00000555276 (SYNJ2BP-COX16-001) 70326352-70416984 protein_coding
ENST00000617124 (SYNJ2BP-COX16-005) 70326352-70416984 protein_coding
ENST00000617196 (SYNJ2BP-COX16-003) 70326350-70416984 protein_coding
ENST00000618385 (SYNJ2BP-COX16-004) 70359582-70416984 nonsense_mediated_decay
ENST00000621525 (SYNJ2BP-COX16-002) 70326064-70417074 protein_coding
CIL_0002M5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090935-ENSMUSG00000008438 CGP 10090 12:81497941-81568474
GeneTranscriptPositionBiotype
ENSMUSG00000008438 (Adam21)
a disintegrin and metallopeptidase domain 21 		ENSMUST00000008582 (Adam21-001) 81558584-81568474 protein_coding
ENSMUSG00000021139 (Gm20498)
predicted gene 20498 		ENSMUST00000110339 (Gm20498-003) 81480937-81532877 processed_transcript
ENSMUST00000164386 (Gm20498-001) 81358860-81532905 protein_coding
ENSMUST00000166664 (Gm20498-002) 81470603-81532882 protein_coding
ENSMUST00000168961 (Gm20498-006) 81474617-81532877 processed_transcript
ENSMUST00000170958 (Gm20498-005) 81474595-81532761 processed_transcript
ENSMUST00000171459 (Gm20498-004) 81474559-81532877 nonsense_mediated_decay
ENSMUSG00000090935 (Synj2bp)
synaptojanin 2 binding protein 		ENSMUST00000019829 (Synj2bp-005) 81501796-81504962 retained_intron
ENSMUST00000114201 (Synj2bp-002) 81504121-81511430 protein_coding
ENSMUST00000163402 (Synj2bp-001) 81497941-81532911 protein_coding
ENSMUST00000164431 (Synj2bp-004) 81499142-81532899 protein_coding
ENSMUST00000169158 (Synj2bp-003) 81504251-81532880 protein_coding
ENSMUSG00000091587 (Gm17191)
predicted gene 17191 		ENSMUST00000165200 (Gm17191-001) 81532035-81533358 processed_transcript
ENSMUSG00000091947 (6530401F13Rik)
RIKEN cDNA 6530401F13 gene 		ENSMUST00000166971 (6530401F13Rik-001) 81532968-81557458 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M5_0001ENSG00000139985ENST00000603540ENSG00000213463ENST00000256366ENST00000554216ENSG00000257759ENST00000556646ENSG00000258644ENST00000555276ENST00000617124ENST00000617196ENST00000618385ENST00000621525CIL_0002M5_0002ENSMUSG00000008438ENSMUST00000008582ENSMUSG00000021139ENSMUST00000110339ENSMUST00000164386ENSMUST00000166664ENSMUST00000168961ENSMUST00000170958ENSMUST00000171459ENSMUSG00000090935ENSMUST00000019829ENSMUST00000114201ENSMUST00000163402ENSMUST00000164431ENSMUST00000169158ENSMUSG00000091587ENSMUST00000165200ENSMUSG00000091947ENSMUST00000166971
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M5_0001ENSG00000139985ENST00000603540ENSG00000213463ENST00000256366ENST00000554216ENSG00000257759ENST00000556646ENSG00000258644ENST00000555276CIL_0002M5_0002ENSMUSG00000008438ENSMUST00000008582ENSMUSG00000021139ENSMUST00000110339ENSMUST00000164386ENSMUSG00000090935ENSMUST00000019829ENSMUST00000163402ENSMUST00000164431ENSMUSG00000091587ENSMUST00000165200ENSMUSG00000091947ENSMUST00000166971
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139985 ENST00000603540 N/A 0.068±0.00 0.129±0.00 0.370±0.31 0.027±0.00 0.058±0.00 0.100±0.04 0.022±0.00 0.235±0.19 0.427±0.00 0.218±0.00 0.058±0.03 0.037±0.01 4.261±2.58
ENSG00000213463 ENST00000256366 2.981±0.00 5.664±0.00 3.908±0.00 1.705±0.11 6.311±1.14 6.306±0.49 5.821±3.27 10.666±4.01 5.218±0.22 4.097±1.42 3.285±0.39 2.679±1.11 3.254±1.89 4.398±0.88
ENST00000554216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.527±0.00
ENSG00000257759 ENST00000556646 N/A 0.067±0.00 N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A 0.112±0.00 0.381±0.33 N/A 0.531±0.02
ENSG00000258644 ENST00000555276 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.925±0.00 N/A 33.135±0.00 30.483±0.00 25.387±0.00
ENST00000617124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008438 ENSMUST00000008582 0.045±0.03 0.077±0.02 0.046±0.01 0.241±0.08 0.043±0.02 0.061±0.01 0.030±0.01 0.029±0.02 0.029±0.02 0.026±0.00 0.029±0.01 0.115±0.13 0.044±0.02 7.021±2.47
ENSMUSG00000021139 ENSMUST00000110339 N/A N/A N/A N/A N/A 12.697±0.00 N/A N/A N/A N/A N/A 13.218±0.00 N/A 23.392±0.00
ENSMUST00000164386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.939±0.11 12.925±0.00 17.747±2.45
ENSMUST00000166664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090935 ENSMUST00000019829 12.928±0.48 N/A N/A N/A 12.734±2.51 11.677±0.00 10.384±2.11 13.229±0.00 16.349±1.60 12.065±1.92 N/A 14.903±2.80 N/A 36.545±9.69
ENSMUST00000114201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163402 3.742±0.91 3.984±0.65 4.738±0.56 3.633±0.67 2.736±0.57 4.102±0.95 3.026±0.55 3.699±0.86 3.816±1.34 4.052±0.46 2.372±0.26 4.368±2.06 2.010±0.79 6.133±1.01
ENSMUST00000164431 5.509±0.88 8.360±1.87 13.893±2.00 2.725±0.00 4.948±1.05 4.909±1.47 4.219±0.29 8.059±1.00 7.266±1.87 5.997±1.00 9.185±0.72 6.264±1.44 5.451±1.75 4.615±0.00
ENSMUST00000169158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000091587 ENSMUST00000165200 0.294±0.00 N/A 0.125±0.03 0.263±0.07 0.313±0.14 0.295±0.00 0.117±0.00 0.126±0.00 0.194±0.14 0.156±0.00 N/A 0.549±0.38 0.166±0.01 N/A
ENSMUSG00000091947 ENSMUST00000166971 N/A N/A 0.027±0.00 0.135±0.08 N/A N/A 0.067±0.03 N/A 0.009±0.00 N/A 0.046±0.00 0.017±0.00 0.023±0.01 0.042±0.00

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