C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptojanin 2 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019829 Synj2bp-005 ENSMUSG00000090935 10090 - 12:81501796-81504962 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000019829
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000019829 12.928±0.48 12.734±2.51 11.677±0.00 10.384±2.11 13.229±0.00 16.349±1.60 12.065±1.92 14.903±2.80 36.545±9.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M5 CIL_0002M5_0002 CGP 12:81497941-81568474

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256366 SYNJ2BP-001 protein_coding Homo_sapiens 0 305
ENST00000554216 SYNJ2BP-002 processed_transcript Homo_sapiens 0 309
ENST00000618385 SYNJ2BP-COX16-004 nonsense_mediated_decay Homo_sapiens 0 309

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