C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC037034
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000091964 BC037034 10090 - 5:138259658-138264046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000163268 BC037034-005 138259660-138264046 protein_coding
  ENSMUST00000164132 BC037034-006 138260105-138260945 processed_transcript
  ENSMUST00000164203 BC037034-001 138259659-138263994 protein_coding
  ENSMUST00000167840 BC037034-003 138259658-138263340 protein_coding
  ENSMUST00000170479 BC037034-004 138259660-138264033 retained_intron
  ENSMUST00000171557 BC037034-002 138259659-138263990 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163268ENSMUST00000164203ENSMUST00000167840ENSMUST00000170479ENSMUST00000171557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163268 N/A N/A N/A N/A N/A 13.598±0.00 N/A N/A N/A N/A N/A N/A N/A 8.515±0.00
ENSMUST00000164203 3.012±0.00 N/A N/A N/A 4.886±1.18 7.572±1.03 2.063±0.00 4.492±0.61 3.153±1.96 6.552±4.03 0.896±0.00 7.908±0.00 5.836±1.15 11.539±1.28
ENSMUST00000167840 8.166±1.26 N/A 12.209±3.58 N/A 8.727±1.48 9.383±0.79 1.914±0.23 5.607±1.79 7.618±4.89 6.037±1.77 1.355±0.47 14.253±3.94 8.406±2.38 10.461±1.81
ENSMUST00000170479 N/A N/A N/A 1.714±0.00 N/A 4.153±0.35 N/A 1.731±0.30 N/A N/A 0.395±0.08 6.726±2.08 N/A 0.729±0.00
ENSMUST00000171557 6.875±1.10 8.593±1.91 N/A N/A 5.987±1.19 N/A 1.364±0.00 N/A N/A 5.218±0.49 0.599±0.04 8.556±1.18 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0002JK CIL_0002JK_0002 CGP 5:138255608-138264046
CIL_0005BN CIL_0005BN_0003 CGP 5:138259658-138272840

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078891 C7H7orf43 chromosome 7 open reading frame 43 protein_coding Danio_rerio
ENSG00000146826 C7orf43 chromosome 7 open reading frame 43 protein_coding Homo_sapiens

Loading